Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq223 120 2e-22 >seq223 Length=821444 Score = 120 bits (132), Expect = 2e-22 Identities = 234/340 (69%), Gaps = 7/340 (2%) Strand=Plus/Minus Query 43950 GGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGT 44009 |||||||| | || || || ||||| ||||| ||||||||||||||||| || || | Sbjct 601719 GGTTTCAAGTCATGATGGAGAACATTCACTCGGAGATGTACAGTCTTCTGATTGACACCT 601660 Query 44010 ACATCAAAGATGGGCACGAGAAGCATCGAT-TGTTTAATGCGATAGAAACAGTACCTGCG 44068 | | || ||| | |||||| | || ||||| | || | || ||| | ||| Sbjct 601659 ATGTGAAGGATCCCAAAGAGAAG-ACGTATCTGTTTGACGCCGTCGACACAATCCCTTGC 601601 Query 44069 ATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA-ATTCAAATGATTCT---TTTGG 44124 ||| | |||||||||||||| | |||||| | |||| || || |||| Sbjct 601600 ATTCGCAAGAAAGCAGACTGGGCTTTGCGATGGATCTCAGACAAA-GAGTCGAGCTTTGC 601542 Query 44125 AGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGC 44184 |||| || || || || || | ||| |||||||| ||||| || ||||||||||| | Sbjct 601541 TCAACGTCTGGTTGCCTTCGCTGCTGTCGAAGGCATCTTCTTCTCTGGATCGTTTGCATC 601482 Query 44185 CATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAAT 44244 ||| || ||| | |||| ||| | |||||||| | || || || || ||| | || Sbjct 601481 CATCTTCTGGCTGAAGAGCAAGGGTCTCATGCCTGGCCTCACCTTCTCCAACGAGCTCAT 601422 Query 44245 AAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTG 44284 ||||||||||||| | ||| || ||||| ||| || Sbjct 601421 CTCTCGTGATGAAGGCATGCATACGGACTTTGCATGCCTG 601382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397454430545620