Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 seq79 87.8 2e-12 >seq1 Length=1141665 Score = 127 bits (140), Expect = 2e-24 Identities = 169/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||||||||| | || | ||||| || | ||||| || || || || |||||||||| Sbjct 806418 TGCCTCCGCGGAGACGAAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGC 806477 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 ||| | | || ||||||| || ||||| |||||| |||||||||| || |||||||| | Sbjct 806478 TCAAGGTACGGCCGTCTTCAAGTTGTTTGCCGGCGAAAATGAGACGTTGCTGATCCGGGG 806537 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || |||||| || | | || | ||||| ||| || | Sbjct 806538 GAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGA 806597 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 | || ||||| || | ||||| || ||||| ||||| || || ||||| |||| Sbjct 806598 CCTCAAGAGTGATGGTCTTGCCAGTAAGAGTCTTCACGAATATCTGCATGACTGC 806652 >seq79 Length=400725 Score = 87.8 bits (96), Expect = 2e-12 Identities = 258/392 (66%), Gaps = 7/392 (2%) Strand=Plus/Minus Query 131638 GTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCT 131697 ||||| || || || | ||| ||||| || || ||| || || || |||| || | Sbjct 383021 GTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAAAGCATAGAACAAGTCCCG 382962 Query 131698 AGCTTTTTTCTCTTCTGTACCCATAAtttttt-tCAAATTTAAAAAGTCCAAAATGTCCG 131756 ||| | ||||||| | || || || ||| ||| || |||||||| || | ||||| Sbjct 382961 TGCTCTGACCTCTTCTTTGCC-ATGGTTCTTTCTCAGGTTCAAAAAGTCGAACACGTCCG 382903 Query 131757 CATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTTA---CCGCCTTGATTAA 131813 | |||||||| || | || | || | || ||| ||||| ||||| |||| || Sbjct 382902 CGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTGCCGCCCTGATCAA 382843 Query 131814 CATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCAT 131873 | | || | | |||||| | || || | |||||| || || |||| | | |||| Sbjct 382842 CGTACCGTGCTGTATTGTTGAAGACACGAAGCATGGGGATCAGGCCATTGGAGGTACCAT 382783 Query 131874 TGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTC 131933 |||||| ||| || || |||| | || ||| | ||||| |||||||||| Sbjct 382782 TGGTGCCTGCAATATAAGATCCCGTGGCACGAATGCAATGAGCATTGAGACCAATACCTC 382723 Query 131934 C-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTG 131992 | || || || ||||| | || || | | || |||| ||| || || || | ||| Sbjct 382722 CAGCTGT-CTTGGAGATCATGGCACAGGTCTTGAGGGTGTCATAAATGCCCTCGATACTG 382664 Query 131993 TCCGCGGCAATGTCGACTAAAAAGCAAGAGGA 132024 || | ||||||| || ||||| ||||| Sbjct 382663 TCTTCCTTCATGTCGATCAAGAAGCATGAGGA 382632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932722040288