Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq79 181 1e-40 >seq79 Length=400725 Score = 181 bits (200), Expect = 1e-40 Identities = 558/851 (66%), Gaps = 29/851 (3%) Strand=Plus/Minus Query 111242 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAT 111301 || |||| |||||| ||||| |||||| | | ||||| || | ||| || || || Sbjct 383329 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCGGTGCAA 383270 Query 111302 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCC 111361 | |||||| ||| || || ||||| ||||| ||||| |||||| ||||||| ||||| Sbjct 383269 AGGTTGGAGCTCCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCT 383210 Query 111362 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AAC 111420 || |||||||||||||| || || ||||| || |||| | ||| ||||| | ||| | | Sbjct 383209 TTATAGAGCATGTAGGGTGTACCAGTCTCGGTTTGTGCCTCGAGGATAGCATACCAGAGC 383150 Query 111421 ATCGGCGGCTGGTACA--ATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGG 111478 || | | || | ||| ||||| | || |||||| ||| || || ||| || Sbjct 383149 TTCTGAGCCTTG-ACAGTCTGGCG--ACCACGACCCTCCCTCTCATATTTCTCGTATAGT 383093 Query 111479 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 111538 || | ||||| || || | |||| ||||| || |||| | |||||||| || Sbjct 383092 GCATTGAACTCATCGCCATAGACATCGGCAAGACCAGGGGCCTCATGGGGACAGAAGAGT 383033 Query 111539 GACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC-AGGGAT 111595 | ||||| || ||| ||| || || | |||||| | ||| ||| ||||| | | || Sbjct 383032 GTCCATT--CCTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAAAGCAT 382975 Query 111596 GAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAAC 111655 || || | | | | || ||||||| | || ||||| || | | | || Sbjct 382974 AGAACAAGTCCCGTGCTCTGA-CCTCTTCTTTGCCATGGTTCTTTCTCAGGTTCAAAAAG 382916 Query 111656 TCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC--- 111712 || | | ||||||||||| ||||| || |||| || | | || | ||||| Sbjct 382915 TCGAACACGTCCGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACC---TGGACGCTTG 382859 Query 111713 ---CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATA 111769 || | |||| || || || ||||| ||| || || |||||||| || || | Sbjct 382858 TTGCCGCCCTGATCAACGTACCGTGCTGTATTGTTGAAGACACGAAGCATGGGGATCAGG 382799 Query 111770 CCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATG 111829 |||| || |||||| || || |||| |||| |||| | | || ||| Sbjct 382798 CCATTGGAGGTACCATTGGTGCCTGCAATATAAGATCCCGTGGCAC-GAATGCA---ATG 382743 Query 111830 TGCAT----CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 111885 |||| |||||||| ||||| ||| ||||| ||||| | | || || | Sbjct 382742 AGCATTGAGACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTC 382683 Query 111886 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945 ||| || || | ||| ||| ||||| || |||| | |||||| ||| | || || Sbjct 382682 ATAAATGCCCTCGATACTGTCTTCCTTCATGTCGATCAAGAAGCATGAGGATAGTTGAGG 382623 Query 111946 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACAT 112005 | || || || |||||||| || || || | ||||| |||| ||||||||| Sbjct 382622 TTGAGGAGTTCCGGCATTGAACAGTGTCGGCGAAGCGTGGGTGAAGCACTTTTGGGACAT 382563 Query 112006 CTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCG 112065 | || ||||| | | | |||| || || ||||| ||||||| ||| || || Sbjct 382562 GAGATTATACGTCTCGATGGCCTTTTCAACATCATCGCCGTGAATGCCGACTGCCACACG 382503 Query 112066 CATGAACATGT 112076 ||| | ||||| Sbjct 382502 CATAAGCATGT 382492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029456470400