Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq79 178 1e-39 seq190 140 4e-28 seq223 93.3 5e-14 >seq79 Length=400725 Score = 178 bits (196), Expect = 1e-39 Identities = 466/707 (66%), Gaps = 22/707 (3%) Strand=Plus/Plus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 |||||||| | | ||| |||||||| ||| || ||||| |||| || |||||||| Sbjct 382548 GAGACGTATAATCTCATGTCCCAAAAGTGCTTCACCCACGCTTCGCCGACACTGTTCAAT 382607 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 || || || ||| ||||| | || |||||| || | | |||||||| ||| Sbjct 382608 GCCGGAACTCCTCAACCTCAACTATCCTCATGCTTCTTGATCGACATGAAGGAAGACAGT 382667 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 ||||| ||||| || || || |||||| |||||| ||||||||| | || ||| Sbjct 382668 ATCGAGGGCATTTATGACACCCTCAAGACCTGTGCCATGATCTCCAAGACAGCTGGAGGT 382727 Query 53423 ATCGGTATCCACTGCTCGAA-CGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 || ||| || | ||||| | | ||||| | || | || || || || || Sbjct 382728 ATTGGTCTCAA-TGCTCATTGCATTCGTGCCACGGGATCTTATATTGCAGGCACCAATGG 382786 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 | || |||| | | || ||||| || ||||||||||| || || |||||||| | Sbjct 382787 TACCTCCAATGGCCTGATCCCCATGCTTCGTGTCTTCAACAATACAGCACGGTACGTTGA 382846 Query 53542 CCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCG 53600 ||||| || ||||| | ||| | | || ||||||||||||||||| |||||||| | Sbjct 382847 TCAGGGCGGCAACAAGCGTCCAGGTG-CCTTTGCCATCTACCTCGAGCCCTGGCACGCGG 382905 Query 53601 ACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTG 53660 || | | || ||| | | ||| | ||| || || | |||||| | | || | Sbjct 382906 ACGTGTTCGACTTTTTGAACCTGAGAAAGAACCATGGCAAAGAAGAGGTCAGAGCACGGG 382965 Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720 || |||| ||| |||||| ||| ||| | |||||| || || |||||| || ||| Sbjct 382966 ACTTGTTCTATGCTTTGTGGACTCCTGACTTGTTCATGGAACGTGTCGAGAAGAACCAGG 383025 Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780 | ||| || | || || | ||| ||| || || | |||||| || || |||| Sbjct 383026 AATGGACACTCTTCTGTCCCCATGAGGCCCCTGGTCTTGCCGATGTCTATGGCGATGAGT 383085 Query 53781 TTA---------ACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGG 53831 | | |||||| ||| || | | | || || ||| ||| | Sbjct 383086 TCAATGCACTATACGAGAAATATGAGAGG---GAGGGTCGTGGTCGC------CAGACTG 383136 Query 53832 TCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGT 53891 ||||||| | || | ||| |||| |||||| || || ||||| || || || | Sbjct 383137 TCAAGGCTCAGAAGCTCTGGTATGCTATCCTCGAGGCACAAACCGAGACTGGTACACCCT 383196 Query 53892 ACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 ||||| ||| || ||| | |||| ||||||||||||||||||| Sbjct 383197 ACATGCTCTATAAAGATGCCTGCAACAGGAAGAGCAACCAGAAGAAC 383243 Score = 84.2 bits (92), Expect = 2e-11 Identities = 104/141 (74%), Gaps = 6/141 (4%) Strand=Plus/Plus Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846 || ||||||||||| | |||||| ||||| || || || |||||| | || || | || Sbjct 384075 GCGGATCGTGGTGCATTCATCGATCAGTCTCAATCCCTCAACATCCACCTGAAGGAGCCA 384134 Query 55847 TCACTGGCCAAGTT---GAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACG 55903 | ||| |||| | |||| ||||||||| || ||||| | ||| |||||||| Sbjct 384135 ACCATGGGCAAGATTACGAGC---ATGCACTTTGCAGGCTGGAAAATGGGCCTCAAGACC 384191 Query 55904 GGTATGTACTATCTGCGGACC 55924 || |||||||| ||||| ||| Sbjct 384192 GGCATGTACTACCTGCGTACC 384212 >seq190 Length=330984 Score = 140 bits (154), Expect = 4e-28 Identities = 216/302 (72%), Gaps = 6/302 (2%) Strand=Plus/Minus Query 117302 CGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAAT 117361 || |||||||| ||||| | |||||||| ||| | || || || ||||| ||| Sbjct 313212 CGGGTGAAAATATAACGGGCGCTTGCAGAATCGCTACCGCCCTGGTTTCGGGTACCAAAT 313153 Query 117362 TGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTG 117421 || || || ||||| | ||| | ||||| | || ||||||||||| ||||| Sbjct 313152 TGGCCCGAAGGTTCCAATAAGTTGACATTGTTCGATCCGACAAAGTTTTGCGCCAATCCA 313093 Query 117422 ACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCA--CGT 117479 |||||||| ||||| | ||||| ||||||||||||||| || ||| | | Sbjct 313092 ACAATCGTCTGCTGGAGAGATGTTTCACCGTGGTGATACGCCGTCAAA-CCACCAACCAT 313034 Query 117480 AGCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAA 117539 | |||||||||| ||| |||||||| || | | | || ||||| ||||||||| | Sbjct 313033 A-CCCGCCAGCTCAGCAACCTTCATATCCTTCTTTAAATTGCGCTTGAAGCAGGCATACA 312975 Query 117540 TCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGA-GGGATCGAACGCTTGATG 117598 | || || ||||||| ||||||||||||||| |||| ||| ||||| || || || || Sbjct 312974 TGACTTTTCGCTGACCGGGCTTCAGACCATCCACCAC-TGAGGGGATGGATCGGATGTTG 312916 Query 117599 TC 117600 || Sbjct 312915 TC 312914 Score = 102 bits (112), Expect = 9e-17 Identities = 299/450 (66%), Gaps = 23/450 (5%) Strand=Plus/Minus Query 151868 AGCTGAATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGG 151927 |||| | || || |||||||| || ||||||||||| || | ||| || ||||| ||| Sbjct 313370 AGCTCCAGCCCGTGCCGATGCCATCGGCACCGTTGACAAGGACCATGGGGACAATCGGGA 313311 Query 151928 CGTAAAACTCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAA----ACGGAA 151983 |||| | ||| || || | || | |||||| |||| | | | | | || Sbjct 313310 CGTATACCTCAGGTTCAATCTTC---CTGTCATC-ATCAAGGTTGTAGGAGAGCAGGGGT 313255 Query 151984 TTGTCAGCCGGATCGAATA--TCCGTCGAGTCATAGGACTCAAAC-GCGTGAAGATGTAT 152040 | ||| || | | ||||| | | | | || ||| | ||| | ||||| || || Sbjct 313254 TCGTCGGCTTGGTGGAATAGTTTCCTTG---CAAAGGGCGATAACCGGGTGAAAATATAA 313198 Query 152041 CGGGAGCTGGCCGCATCCTTGCCACCTGCCAGC---CGCGTTCCAAACTGTCCAGAGGGC 152097 |||| ||| || | ||| || ||| || | || || ||||| || || || || Sbjct 313197 CGGGCGCTTGCAGAATC---GCTACCGCCCTGGTTTCGGGTACCAAATTGGCCCGAAGGT 313141 Query 152098 TCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCC 152157 || | | ||||| ||||| | || || || || || ||||| |||||||| | Sbjct 313140 TCCAATAAGTTGACATTGTTCGATCCGACAAAGTTTTGCGCCAATCCAACAATCGTCTGC 313081 Query 152158 TGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT-CCCGCCAACTG 152216 || ||| | |||||||||||||||||||||| || | | || ||||||| || Sbjct 313080 TGGAGAGATGTTTCACCGTGGTGATACGCCGTC-AAACCACCAACCATACCCGCCAGCTC 313022 Query 152217 CGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTG 152276 || |||||||| ||| || | | || ||||| ||||| || || || || ||||| Sbjct 313021 AGCAACCTTCATATCCTTCTTTAAATTGCGCTTGAAGCAGGCATACATGACTTTTCGCTG 312962 Query 152277 GGATGGTTTCAAACCGTCCACCACGTGAGG 152306 || |||| ||| |||||||| ||||| Sbjct 312961 ACCGGGCTTCAGACCATCCACCAC-TGAGG 312933 >seq223 Length=821444 Score = 93.3 bits (102), Expect = 5e-14 Identities = 208/309 (67%), Gaps = 5/309 (2%) Strand=Plus/Plus Query 74751 GCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCA 74810 ||||| ||| |||| ||||||||| | || | || || || || | |||||| Sbjct 601389 GCAAAGTCCGTATGCATGCCTTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCA 601448 Query 74811 GGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATG 74870 ||||| || || |||||| ||| ||||||| || || ||| |||||||||| Sbjct 601449 GGCATGAGACCCTTGCTCTTCAGCCAGAAGATGGATGCAAACGATCCAGAGAAGAAGATG 601508 Query 74871 CCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA---CGGTGCATCGGAAGTCATC 74927 ||||||||| || ||||| || || ||||| || || || | | | | ||| Sbjct 601509 CCTTCGACAGCAGCGAAGGCAACCAGACGTTGAGCAAAGCTCGACTCTTTGTCTGAGATC 601568 Query 74928 CAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGC-AGGGACAGTATCGATCGCTTGGAA 74986 || | |||||| || || |||| | || || ||||| || |||| || | || Sbjct 601569 CATCGCAAAGCCCAGTCTGC-TTTCTTGCGAATGCAAGGGATTGTGTCGACGGCGTCAAA 601627 Query 74987 GAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTC 75046 || | |||||||| ||||||||| || ||||||||| ||| |||| |||| Sbjct 601628 CAGATACGTCTTCTCTTTGGGATCCTTCACATAGGTGTCAATCAGAAGACTGTACATCTC 601687 Query 75047 CGAATGAAT 75055 ||| ||||| Sbjct 601688 CGAGTGAAT 601696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213783775200