Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1 129 5e-25 >seq1 Length=1141665 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||||||||| || || ||||| || |||||| | || |||||||| || || | Sbjct 806647 CATGCAGATATTCGTGAAGACTCTTACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAG 806588 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | ||||| || ||||| ||||| || ||||| || || ||||| Sbjct 806587 CGACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCA 806528 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || ||| | || | ||||||||||||| | |||||| | ||| | ||| ||||| Sbjct 806527 GCAACGTCTCATTTTCGCCGGCAAACAACTTGAAGACGGCCGTACCTTGAGCGACTACAA 806468 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| || | || ||||| | ||| | || || ||||| Sbjct 806467 CATCCAGAAGGAGTCTACTCTTCACTTGGTCCTTCGTCTCCGCGGAGGCAT 806417 Score = 118 bits (130), Expect = 9e-22 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||||||||| || || || || || |||||| | || || || || || ||| || Sbjct 806419 CATGCAGATATTCGTCAAGACACTTACTGGCAAGACGATCACGCTCGAGGTTGAATCGAG 806360 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | || || | ||||| || || |||||||| |||||||| || || ||||| Sbjct 806359 TGATACCATCGACAACGTCAAGAGCAAGATCCAAGACAAGGAAGGCATCCCTCCGGATCA 806300 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| ||| | || | || ||||| |||||||||||| | ||| | ||||| ||||| Sbjct 806299 ACAACGTCTGATCTTTGCTGGCAAGCAATTGGAAGACGGCCGTACCCTCTCCGACTACAA 806240 Query 27167 CATTCAAAAGGAGTCGACCTTACAT 27191 ||| || ||||| || ||| | ||| Sbjct 806239 CATCCAGAAGGAATCAACCCTCCAT 806215 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || || || || |||||| | ||||| || || |||||| || Sbjct 806190 ATGCAGATATTTGTCAAGACACTTACTGGCAAGACGATTACACTGGAGGTGGAAAGCTCA 806131 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||||||||| || || || || ||||| ||| Sbjct 806130 GACACAATCGACAACGTCAAGTCGAAGATTCAAGACAAGGAGGGTATTCCGCCCGACCAA 806071 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || ||||| || ||||| ||| | || | || || |||||| Sbjct 806070 CAGCGACTGATCTTTGCTGGCAAGCAGTTGGAGGACGGACGAACACTGTCGGACTACAAC 806011 Query 27168 ATTCAAAAGGAG 27179 ||||| |||||| Sbjct 806010 ATTCAGAAGGAG 805999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434916638580480