Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq78 86.0 6e-12 >seq78 Length=46961 Score = 86.0 bits (94), Expect = 6e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 34643 CTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCT 34702 || || || || || | |||||||| | ||||| || ||||||||||| |||||| Sbjct 42275 CTATACCAGCGCTCCTGTGACATGGGACTCGGGGTCCCCTTCAACATTGCCTCATACGCT 42334 Query 34703 CTGCTCACGTACATGATCGCTCATGTCGTGGGGT-TGGTTCCTGGGGAGCTGGTGCATAC 34761 || || ||| ||||| | ||||| | |||| | | | || || || |||||| | ||||| Sbjct 42335 CTACTGACGCACATGCTAGCTCACG-CGTGCGATCTTGTGCCGGGAGAGCTGATCCATAC 42393 Query 34762 GTTGGGGGATGCGCATATCTACCTGAACCACATCGA 34797 |||| ||||||||| | || || | || ||||| Sbjct 42394 CATGGGCGATGCGCATGTGTATCTTGATCATATCGA 42429 Score = 86.0 bits (94), Expect = 6e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 6548 TCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACC 6607 ||||| || | || || | ||||||||| |||| ||||| | |||||| || || || Sbjct 42429 TCGATATGATCAAGATACACATGCGCATCGCCCATGGTATGGATCAGCTCTCCCGGCACA 42370 Query 6608 A-ACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGG 6666 | | | |||| | ||||| | ||||| ||| || |||||||| ||||||||||| || Sbjct 42369 AGATCGCACG-CGTGAGCTAGCATGTGCGTCAGTAGAGCGTATGAGGCAATGTTGAAGGG 42311 Query 6667 CACCCCTAACCCCATGTCTCCCGATCGTTGATAGAG 6702 ||||| | |||||||| | || || || || || Sbjct 42310 GACCCCGAGTCCCATGTCACAGGAGCGCTGGTATAG 42275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448260584537280