Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1 165 2e-35 seq287 120 7e-22 seq324 107 4e-18 seq79 96.9 8e-15 >seq1 Length=1141665 Score = 165 bits (182), Expect = 2e-35 Identities = 169/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | |||||| || || || || || || || |||||||| || || | ||||| Sbjct 806198 CGAAGCCGTAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTA 806257 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || ||||||| |||||||| || ||||| || |||||||| || ||||| | ||| Sbjct 806258 CGGCCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGATCCGGAGGGATGCCT 806317 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||| |||||||| || ||||| |||||||| ||| |||||||||||| Sbjct 806318 TCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTATCACTCGATTCAACCTCGAGC 806377 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||||||| || || || ||||| || || | |||||| Sbjct 806378 GTGATCGTCTTGCCAGTAAGTGTCTTGACGAATATCTGCAT 806418 Score = 143 bits (158), Expect = 6e-29 Identities = 161/213 (76%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961 ||||| | ||||||||| ||||| || |||||||| || || | ||||| | | || || Sbjct 806435 AGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAGG-TACGGCCGTC 806493 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 ||| || || ||||| ||||| || || ||||| || || || |||| || |||||||| Sbjct 806494 TTCAAGTTGTTTGCCGGCGAAAATGAGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTC 806553 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 ||| ||||| || || || ||||||||||| | || ||||| |||||||| || Sbjct 806554 CTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGT 806613 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || || |||||||| || || | |||||| Sbjct 806614 CTTGCCAGTAAGAGTCTTCACGAATATCTGCAT 806646 >seq287 Length=185442 Score = 120 bits (132), Expect = 7e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || ||||| || || || ||||| | ||||| || || |||||||| |||||||| Sbjct 123769 TTCTGGATATTGTAGTCACTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 123710 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | || || ||||| || || | ||||||||||| |||||||| || ||||| ||| Sbjct 123709 AATCGCTGCTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 123650 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| || || |||||||| ||||| ||||| |||||||| ||||| || || Sbjct 123649 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 123591 >seq324 Length=116152 Score = 107 bits (118), Expect = 4e-18 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| ||||| || ||||| || || |||||||| || || | || || Sbjct 50544 ACGAAGACGGAGGACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGT 50603 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || ||||| || |||||||| |||||||| |||||||| ||||| || |||| || Sbjct 50604 GCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGAATCCC 50663 Query 211013 TTCCTTGTC 211021 ||||||||| Sbjct 50664 TTCCTTGTC 50672 >seq79 Length=400725 Score = 96.9 bits (106), Expect = 8e-15 Identities = 188/278 (68%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATT 178147 || |||||||| ||||||||||| ||| ||||||||| || ||| |||| | Sbjct 383248 CCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCTTTATAGAGCATGTAGGGTGTA 383189 Query 178148 CCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTT 178207 || ||| | ||| ||| |||| || || ||| |||| ||| || |||||||| Sbjct 383188 CCAGTCTCGGTTTGTGCCTCGAGGATAGCATACCAGAGCTTCTGAGCCTTGACAGTCTGG 383129 Query 178208 TTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACA 178267 | || || |||| || || | ||| || | | ||| || ||||||||| Sbjct 383128 CGACCACGACCCTCCCTCTCATATTTCTCGTATAGTGCATTGAACTCATCGCCATAGACA 383069 Query 178268 TCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACT 178327 || | ||||| || ||||||| ||| |||||||| |||| | || | || || Sbjct 383068 TCGGCAAGACCAGGGGCCTCATGGGGACAGAAGAGTGTCCATTCCTGGTTCTTCTCGACA 383009 Query 178328 CGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 |||| |||||| | ||||| ||||| | |||||||| Sbjct 383008 CGTTCCATGAACAAGTCAGGAGTCCACAAAGCATAGAA 382971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159147188070260