Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1 107 1e-18 >seq1 Length=1141665 Score = 107 bits (118), Expect = 1e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || || || || || || |||||||| || || || |||| Sbjct 806646 ATGCAGATATTCGTGAAGACTCTTACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 806587 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || | || ||||| || || | || || ||||| Sbjct 806586 GACACCATCGACAATGTCAAGTCCAAGA-TTCAGGACAAGGAGGGCATTCCCCCGGATCA 806528 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||| | || || |||||||||||||| ||||||| || || || |||| ||||| Sbjct 806527 GCAACGTCTCATTTTCGCCGGCAAACAACTTGAAGACGGCCGTACCTTGAGCGACTACAA 806468 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 806467 CATCCAGAAGGAGTCTAC 806450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008265284592