Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1 150 4e-31 seq114 123 6e-23 seq324 118 3e-21 seq287 107 5e-18 >seq1 Length=1141665 Score = 150 bits (166), Expect = 4e-31 Identities = 152/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| |||||||| || | ||| |||||| || || || | ||||| || | || || Sbjct 805969 ACGCAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGACAGTGT 806028 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || || || | |||||| ||||| ||||| ||||| |||||||||||||||||||| Sbjct 806029 TCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGTCGCTGTTGGTCGGGCGGAATACC 806088 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| ||||| ||| || ||||| ||||||||| ||||||| || | Sbjct 806089 CTCCTTGTCTTGAATCTTCGACTTGACGTTGTCGATTGTGTCTGAGCTTTCCACCTCCAG 806148 Query 225672 CGTGATCGTCTTGCCCGT 225689 || ||||||||||| || Sbjct 806149 TGTAATCGTCTTGCCAGT 806166 Score = 129 bits (142), Expect = 1e-24 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||||| || ||||| || ||||| || |||| ||||| |||| | || Sbjct 806198 CGAAGCCGTAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTA 806257 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || ||||| | ||||| ||||| ||||| || |||||||| || || || || ||| Sbjct 806258 CGGCCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGATCCGGAGGGATGCCT 806317 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||||||||| ||| || |||||||| || | ||| || || | | Sbjct 806318 TCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTATCACTCGATTCAACCTCGAGC 806377 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||||| || | || || | ||| | ||||| Sbjct 806378 GTGATCGTCTTGCCAGTAAGTGTCTTGACGAATATCTGCAT 806418 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| ||||| || || || |||| ||||| ||| ||| || | || ||| Sbjct 806435 AGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTCT 806494 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || || || || ||||| || || ||||| || || || ||||| || |||||||| Sbjct 806495 TCAAGTTGTTTGCCGGCGAAAATGAGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCC 806554 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| ||||||||||| || || || || | ||||| ||| Sbjct 806555 TGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTC 806614 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||| || | ||| | ||||| Sbjct 806615 TTGCCAGTAAGAGTCTTCACGAATATCTGCAT 806646 >seq114 Length=24751 Score = 123 bits (136), Expect = 6e-23 Identities = 192/274 (70%), Gaps = 3/274 (1%) Strand=Plus/Minus Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGAT 7499 ||| ||||||||||| |||| || ||||| ||| | ||||| ||||| | | Sbjct 24334 AACATTATATTTAATGTTTGCTGTATTTTCAGGTTTAGCTGGTACAGCTTTTTCAGTATT 24275 Query 7500 TATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTA 7559 ||||| ||||||||| | | ||| || ||| | | | |||| ||| | || Sbjct 24274 AATAAGATTAGAATTATCAGGTCCTGGAGTACAATTCATAGCAGATAAT---CAATTATA 24218 Query 7560 CAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTAT 7619 ||| ||| || || || ||||| | ||||||||||||||| | || ||||| | | Sbjct 24217 TAACAGTATAATAACAGCTCATGCTATAGTTATGATTTTCTTTATGGTAATGCCTGCCTT 24158 Query 7620 GATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTT 7679 ||||| ||||| || |||| || | || |||||||| || | ||| |||||||| || Sbjct 24157 AATAGGTGGTTTTGGTAATTTCTTACTACCATTAATGATAGGAGGTCCAGATATGGCATT 24098 Query 7680 TCCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 || || | || ||||||||||| |||||| || Sbjct 24097 CCCTAGATTAAATAATATAAGTTTCTGATTATTA 24064 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/103 (82%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||| || || |||||||||||||| | |||||| || | |||||||| ||||| |||| Sbjct 23653 TTCTGGGTGTCCAAAAAATCAGAAAAGATGTTGGTATAATATAGGATCTCCTCCTCCTGC 23712 Query 370732 TGGATCAAA-AAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773 | ||||| |||| | ||||||||||||||||| |||||||| Sbjct 23713 TACTTCAAAGAAAGAT-GTATTAAAATTTCTATCTGTTAAAAC 23754 >seq324 Length=116152 Score = 118 bits (130), Expect = 3e-21 Identities = 104/130 (80%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| |||||||| |||||||| || |||| ||||| |||| | ||| Sbjct 50544 ACGAAGACGGAGGACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGT 50603 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| || ||||| || |||||||| || ||||| |||||||| ||||| || Sbjct 50604 GCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGAATCCC 50663 Query 225612 TTCCTTGTCT 225621 |||||||||| Sbjct 50664 TTCCTTGTCT 50673 >seq287 Length=185442 Score = 107 bits (118), Expect = 5e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| |||||| || || || | ||||| || || ||||| || |||||||| Sbjct 123769 TTCTGGATATTGTAGTCACTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 123710 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 | ||| || |||||||| || || |||||||||||||||||||| ||| || ||| Sbjct 123709 AATCGCTGCTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 123650 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || ||||| || | || || || | ||||| ||||||||||| Sbjct 123649 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 123606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192526249504856