Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq78 91.5 1e-13 >seq78 Length=46961 Score = 91.5 bits (100), Expect = 1e-13 Identities = 201/295 (68%), Gaps = 10/295 (3%) Strand=Plus/Minus Query 27388 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCCACG 27444 ||||| |||| || || || |||||||| | ||||||| || | | | | |||| Sbjct 42105 TTCCACGCGCTCAGAATAATCCGCCTGTCGTATGGGTTGGTCTTCAATTTTCGCACCACC 42046 Query 27445 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCT--CATGTCCGTGTACT 27502 | |||| | ||| ||||| || | ||||||||||| | | | || |||| ||| Sbjct 42045 TC--TTTG-ATCTGGTCCACTCCTTTGCCCGAGTAGTC-AGCATGGCA-GTCCTCGTATG 41991 Query 27503 CTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 27562 |||| || || |||| |||||| || ||||| || || || ||||||||||| || | || Sbjct 41990 CTGCACCAAAGTGCCGCCATTGAAATCCGTAGACAGGGCCGAGGTCTCCCTCCTCGCGGT 41931 Query 27563 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 27622 | || ||| |||||| | || || | || || ||| ||||||| || | | | Sbjct 41930 CAACAAATCCCAACTTGTCGAGGAATTCCCGCGAGCCATTGCCGTCCCAAATGTGGATGC 41871 Query 27623 CCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 27677 | || ||||| ||| || ||||| | ||| || ||||||| || ||| Sbjct 41870 CTGCGTCAGAGAGAGGTTTCGATGTTGTGCAGCCTGATACAAACCACAACAACTC 41816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369505740908444