Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20monophora_20[genbank_20GCA_5F001642475.1_202016-05-11] 324 sequences; 35,229,797 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1 132 1e-25 seq287 120 7e-22 seq324 93.3 1e-13 seq2 86.0 2e-11 >seq1 Length=1141665 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || |||||||| |||||||| ||| || Sbjct 806415 CAGATATTCGTCAAGACACTTACTGGCAAGACGATCACGCTCGAGGTTGAATCGAGTGAT 806356 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| || ||||| ||||| ||||||||||| || ||| Sbjct 806355 ACCATCGACAACGTCAAGAGCAAGATCCAAGACAAGGAAGGCATCCCTCCGGATCAACAA 806296 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || || | ||||| || | || || |||| || ||| || Sbjct 806295 CGTCTGATCTTTGCTGGCAAGCAATTGGAAGACGGCCGTACCCTCTCCGACTACAACATC 806236 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || |||||||| || ||||| || Sbjct 806235 CAGAAGGAATCAACCCTCCATCTCGT 806210 Score = 127 bits (140), Expect = 5e-24 Identities = 154/206 (75%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| ||||| || || || || ||||| || ||||| || | ||| Sbjct 806643 CAGATATTCGTGAAGACTCTTACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGAC 806584 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| |||||||||||||| || || || || ||||| |||||| Sbjct 806583 ACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAGCAA 806524 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || || || |||||||| ||||| || ||||| || | || |||| ||| || ||| | Sbjct 806523 CGTCTCATTTTCGCCGGCAAACAACTTGAAGACGGCCGTAC-CTTGAGCGACTACAACAT 806465 Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128 ||| || || || || || || |||| Sbjct 806464 CCAGAAGGAGTCTACTCTTCA-CTTG 806440 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || || ||||| || || |||||||||||||||||| Sbjct 806187 CAGATATTTGTCAAGACACTTACTGGCAAGACGATTACACTGGAGGTGGAAAGCTCAGAC 806128 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||| ||||| || || || || || ||||| || Sbjct 806127 ACAATCGACAACGTCAAGTCGAAGATTCAAGACAAGGAGGGTATTCCGCCCGACCAACAG 806068 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||| || || || ||| | || || ||| | || || | || || ||| | Sbjct 806067 CGACTGATCTTTGCTGGCAAGCAGTTGGAGGACGGACGAACACTGTCGGACTACAACATT 806008 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || || || ||||| | || ||||||| Sbjct 806007 CAGAAGGAGAGCACTCTGCACTTGGTGCTGAGACT 805973 >seq287 Length=185442 Score = 120 bits (132), Expect = 7e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || ||||| || || || |||||||||||||| || || ||||| ||| Sbjct 123591 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATC 123650 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || |||||||| ||||| || ||||| ||||| ||||| || |||||||| ||| | Sbjct 123651 GACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGCATCCCACCCGACCAGCAGCGATTG 123710 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 ||||||||||| || || || || ||||| Sbjct 123711 ATCTTCGCCGGCAAGCAACTTGAGGATGG 123739 >seq324 Length=116152 Score = 93.3 bits (102), Expect = 1e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| ||||| || || || ||||||||||| || ||||||||||| || || |||||| Sbjct 50672 GACAAGGAAGGGATTCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 50613 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || || | ||||| |||| || ||| |||| || ||||| || || || || || Sbjct 50612 GACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAATCCACCCTCCACCTGGT 50557 >seq2 Length=480178 Score = 86.0 bits (94), Expect = 2e-11 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 254467 CTCTGCGACTTTTCTCAAATAGTTGTGTCTTTTTTCTTTTCGAAGTCTTTCGAACCGGAG 254526 |||||||||||||| || ||| ||||||| ||||||| || || | |||| || || Sbjct 69448 CTCTGCGACTTTTCGCACATAATTGTGTCGCTTTTCTTCTCTGAGACGGGCGAAACGTAG 69389 Query 254527 GGCTGACTGTCCTCCTCGACCGTGTTTCTTTGGGAGA 254563 ||| ||||| || ||||||||||| ||||| || ||| Sbjct 69388 GGCAGACTGACCACCTCGACCGTGCTTCTTGGGCAGA 69352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203726203010856