Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20multimorphosa_20[genbank_20GCA_5F001646985.1_202016-05- 18] 163 sequences; 33,391,590 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq125 118 7e-22 seq155 104 2e-17 >seq125 Length=1047054 Score = 118 bits (130), Expect = 7e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || || || |||||||| | || || || ||||| |||||||||||||| Sbjct 731593 CCCCCGCGGAGTCTGAGGACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 731534 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | || ||||| ||||| || || ||||| ||||| || Sbjct 731533 AGGGTGCGGCCATCTTCGAGTTGTTTGCCGGCGAAGATCAGGCGCTGTTGGTCAGGCGGA 731474 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| || | || | | || | ||| | || ||||| Sbjct 731473 ATGCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCGATGGTGTCGCTGGACTCGACC 731414 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGC 34392 || | ||||||||| ||||| || || ||||| ||||| || ||||| || Sbjct 731413 TCAAGCGTGATGGTCTTGCCAGTAAGGGTTTTGACAAAAATTTGCATGGC 731364 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||||| |||||||||| ||| | ||||| || ||||| |||||||| || ||| Sbjct 732049 CCACCGCGCAATCTCAGCACCAAGTGCAGCGTACTCTCCTTCTGAATGTTGTAATCCGAC 731990 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| |||||||||||||| |||||||| || | ||||||||| || Sbjct 731989 AGAGTGCGCCCGTCTTCCAACTGCTTGCCCGCGAAAATCAGTCTCTGCTGGTCCGGCGGA 731930 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | |||| ||| | || || Sbjct 731929 ATCCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATCGTATCCGAGCTCTCAACT 731870 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||| || || || || || | ||||| ||||| || ||||| Sbjct 731869 TCCAGCGTAATCGTCTTTCCCGTCAAGGTTTTGACAAAAATTTGCAT 731823 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 |||||||| |||| || || || || | || ||| ||||| ||||||||||| ||| Sbjct 731821 CCGCCGCGAAGCCGGAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCCGAC 731762 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281 ||| ||| |||| |||| |||||| || |||||||| || || |||||||| | |||| Sbjct 731761 AGCGTCCGGCCGTCCTCCAGCTGCTTTCCGGCGAAAATCAGACGTTGCTGGTCAGGCGGG 731702 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| ||||| ||| | | | | |||| ||| |||| || || Sbjct 731701 -ATGCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCGCTCGACTCAAC 731643 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || || || || || || | ||||| ||||| || ||||| Sbjct 731642 CTCGAGAGTAATCGTCTTTCCCGTCAAGGTTTTGACAAATATTTGCAT 731595 >seq155 Length=550677 Score = 104 bits (114), Expect = 2e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| |||||||||||| || |||| |||| || | ||||||||| ||||| || Sbjct 234189 TTCTGGATGTTGTAGTCGCTCAAAGTACGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATC 234248 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 || |||||||| ||| || | || |||||||| ||||| ||| | || | | Sbjct 234249 AGGCGCTGCTGATCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCG 234308 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381 |||| |||| ||| ||||| || | |||||||| ||||| ||||| || || || ||| Sbjct 234309 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 234368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071358197280