Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20multimorphosa_20[genbank_20GCA_5F001646985.1_202016-05- 18] 163 sequences; 33,391,590 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq125 89.7 4e-13 >seq125 Length=1047054 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 || |||||||| || | ||| || || || || |||||||| |||||||||||||| | | Sbjct 732049 CCACCGCGCAATCTCAGCACCAAGTGCAGCGTACTCTCCTTCTGAATGTTGTAATCCGAC 731990 Query 48560 A-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 | | || ||| |||| |||| |||||| || || |||| | | |||||| ||| ||| Sbjct 731989 AGAGTG-CGCCCGTCTTCCAACTGCTTGCCCGCGAAAATCAGTCTCTGCTGGTCCGGCGG 731931 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| || ||| ||||| | || ||||| | ||| Sbjct 731930 AATCCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATCGTATCCGAGCTCTCAAC 731871 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || || || || || | ||||| |||||||| ||||| Sbjct 731870 TTCCAGCGTAATCGTCTTTCCCGTCAAGGTTTTGACAAAAATTTGCAT 731823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250363158163