Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20multimorphosa_20[genbank_20GCA_5F001646985.1_202016-05- 18] 163 sequences; 33,391,590 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq64 100 3e-16 >seq64 Length=213547 Score = 100 bits (110), Expect = 3e-16 Identities = 365/564 (65%), Gaps = 8/564 (1%) Strand=Plus/Minus Query 48243 AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAG-TTCAAGAAAGTC 48301 || || |||| | ||| | ||||| |||||| ||| || | || ||||| |||||| Sbjct 96051 AACAAGTCCCGCGCTCTGACCTCTTCTTTGCCATGGTTCTTTCTCAGGTTCAA-AAAGTC 95993 Query 48302 CATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACC 48361 | | || || |||||||| || | || || || | ||||||| || || || || Sbjct 95992 AAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTGTTGCC 95933 Query 48362 TCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATT 48421 || ||||| | ||| | ||||||||||| | || | | ||| |||| || |||||| Sbjct 95932 GCCCTGATCGACATAGCGAGCAGTATTGTTGAAGACGCGGAGCATGGGGATAAGACCATT 95873 Query 48422 TGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTAT--ATTACTAATTGAA 48479 || | |||||||| || | ||| || ||| | || | || | | |||| Sbjct 95872 GGAGGTTCCATTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGAGCATTG-- 95815 Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539 | || ||||| || || | || || || | ||||| || ||||| || || || Sbjct 95814 AGGCCAATACCTCCGGCTGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATG 95755 Query 48540 CCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAA 48599 || || || || || ||| |||| | || || || ||| |||| ||| || ||| Sbjct 95754 CCCTCGATGCTGTCCTCTTTCATGTCTATCAGGAAGCAAGAGGACAATTGAGGTTGAGGT 95695 Query 48600 GTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTA 48659 || || | ||| || | || || || || || |||| || |||| || | | || Sbjct 95694 GTCCCGGCATTGAACAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGATTG 95635 Query 48660 TATGTTTCAATAACAGAATCTATATC-CCATTGATGTATACCTATAGATACACGCATTAA 48718 || || || || | || | ||| || | || || || | | |||||||| | Sbjct 95634 TACGTCTCGATGGCCTTTTCAACATCGTCACCG-TGGATGCCAACGGCGACACGCATAAG 95576 Query 48719 CATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAA 48778 ||| | ||| || | |||| | | || || || || | || |||||| | ||||| Sbjct 95575 CATGTGTTGGGGCCGTTCAGCGACTTGCTTGCCAATCTTGAGGAGGTATGATCTCTCCAA 95516 Query 48779 TGTTTTAAAACCAAAATAGTTGTA 48802 || || |||||||| || | ||| Sbjct 95515 CGTCTTGAAACCAAAGTATTGGTA 95492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107654703320