Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20multimorphosa_20[genbank_20GCA_5F001646985.1_202016-05- 18] 163 sequences; 33,391,590 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq125 168 2e-36 seq155 123 6e-23 seq81 104 5e-17 seq64 91.5 3e-13 >seq125 Length=1047054 Score = 168 bits (186), Expect = 2e-36 Identities = 170/221 (77%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || ||||| ||||| |||||||| ||| ||| || |||||||| || || | ||||| Sbjct 731587 CGGAGTCTGAGGACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTG 731528 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | |||||||| || || ||||| |||||||| ||||| ||||||||||| |||| || Sbjct 731527 CGGCCATCTTCGAGTTGTTTGCCGGCGAAGATCAGGCGCTGTTGGTCAGGCGGAATGCCC 731468 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||||||||| ||| || || ||||||||||| | || ||||| || Sbjct 731467 TCCTTGTCCTGGATCTTGGATTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGC 731408 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || || || || ||||| | ||||| Sbjct 731407 GTGATGGTCTTGCCAGTAAGGGTTTTGACAAAAATTTGCAT 731367 Score = 161 bits (178), Expect = 2e-34 Identities = 171/224 (76%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||| || || || || || || || |||||||| || |||| || ||| Sbjct 731815 CGAAGCCGGAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCCGACAGCGTC 731756 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || || ||||||||||| || ||||| || || ||||| |||||||| || | ||| Sbjct 731755 CGGCCGTCCTCCAGCTGCTTTCCGGCGAAAATCAGACGTTGCTGGTCAGGCGGGATGCCT 731696 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCG 211070 ||||||||||||||||| || ||||| ||||| ||||| ||| ||||||||| Sbjct 731695 TCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTC---GCTCGACTCAACCTCG 731639 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||||||||| | || || ||||| | ||||| Sbjct 731638 AGAGTAATCGTCTTTCCCGTCAAGGTTTTGACAAATATTTGCAT 731595 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | ||| || || ||| || || ||||| ||||||| || || | || Sbjct 732038 TCTCAGCACCAAGTGCAGCGTACTCTCCTTCTGAATGTTGTAATCCGACAGAGTGCGCCC 731979 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||||| ||||||||| ||||| || || | || ||||| || |||| || ||||| Sbjct 731978 GTCTTCCAACTGCTTGCCCGCGAAAATCAGTCTCTGCTGGTCCGGCGGAATCCCCTCCTT 731919 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||||||||| || ||||| || || || || ||||| ||||| || || || || Sbjct 731918 GTCCTGGATCTTCGACTTGACGTTGTCAATCGTATCCGAGCTCTCAACTTCCAGCGTAAT 731859 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||||||| | || || ||||| | ||||| Sbjct 731858 CGTCTTTCCCGTCAAGGTTTTGACAAAAATTTGCAT 731823 >seq155 Length=550677 Score = 123 bits (136), Expect = 6e-23 Identities = 137/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985 || |||||||| || || | ||| | | | || ||||| ||||||||||| |||||||| Sbjct 234189 TTCTGGATGTTGTAGTCGCTCAAAG-TACGGCCGTCTTCAAGCTGCTTGCCGGCGAAGAT 234247 Query 210986 AAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTC 211045 ||||| || || || || || | ||||||||||| |||||||| || || || || Sbjct 234248 CAGGCGCTGCTGATCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTC 234307 Query 211046 GATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||| ||||| || || |||||||| ||||| ||||| |||||||| ||||| || || Sbjct 234308 GATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 234367 >seq81 Length=457081 Score = 104 bits (114), Expect = 5e-17 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| ||||| || ||||| || || |||||||| || || | || || | || ||||| Sbjct 248650 GACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCGTCTTC 248709 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || |||||||| |||||||| |||||||| ||||| ||||||| ||||||||||| Sbjct 248710 GAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCCGGAGGAATGCCTTCCTTGTC 248766 >seq64 Length=213547 Score = 91.5 bits (100), Expect = 3e-13 Identities = 187/278 (67%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATT 178147 || |||||||| ||||||||||||||| ||| || ||||| ||| |||| | Sbjct 96327 CCCAAGTTCTTCTGGTTGCTCTTTCTGTTGCAGGCGTCCTTGTAGAGCATGTAGGGAGTA 96268 Query 178148 CCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTT 178207 || || | || ||| |||| || || |||||||| ||| || ||| |||| Sbjct 96267 CCGGTTTCGGTCTGTGCCTCGAGGATAGCATACCAAAGCTTCTGAGCCTTGACGGTCTGA 96208 Query 178208 TTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACA 178267 | || || ||||| || | | ||| || | | |||||| |||||||| Sbjct 96207 CGACCACGGCCCTCCTTCTCATATCTCTCGTACAGAGCGTTGAATTCGTCACCATAGACG 96148 Query 178268 TCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACT 178327 ||| ||||| || || |||| |||||||||||| |||| | || | || ||| Sbjct 96147 TCAGAAAGACCAGGTGCTTCATGCGGGCAGAAGAGAGTCCATTCTTGGTTCTTCTCCACG 96088 Query 178328 CGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 |||| |||||| | ||||| ||||| | ||| ||||| Sbjct 96087 CGTTCCATGAACAAGTCAGGAGTCCACAGGGCGTAGAA 96050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159149579183495