Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20multimorphosa_20[genbank_20GCA_5F001646985.1_202016-05- 18] 163 sequences; 33,391,590 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq125 98.7 7e-16 seq155 96.9 2e-15 >seq125 Length=1047054 Score = 98.7 bits (108), Expect = 7e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || |||||||| || || || || ||||| || || || || |||| Sbjct 731367 ATGCAAATTTTTGTCAAAACCCTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAGC 731426 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | ||| | || | | ||||| || || | ||||| || || Sbjct 731427 GACACCATCGACAATGTCAAATCCAAGA-TCCAGGACAAGGAGGGCATTCCGCCTGACCA 731485 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || |||||||||||||| ||||| | ||||| | ||| ||||| Sbjct 731486 ACAGCGCCTGATCTTCGCCGGCAAACAACTCGAAGATGGCCGCACCCTCTCCGACTACAA 731545 Query 23790 CATACAAAAAGAG 23802 ||| || || ||| Sbjct 731546 CATCCAGAAGGAG 731558 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || |||||| | |||||||| ||||| || || |||||||| | || Sbjct 731823 ATGCAAATTTTTGTCAAAACCTTGACGGGAAAGACGATTACGCTGGAAGTTGAGAGCTCG 731882 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | | || || || ||||| || || | ||||| || || Sbjct 731883 GATACGATTGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGGATTCCGCCGGACCAG 731942 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || || ||||| || ||||||||| |||||| | ||||||||| Sbjct 731943 CAGAGACTGATTTTCGCGGGCAAGCAGTTGGAAGACGGGCGCACTCTGTCGGATTACAAC 732002 Query 23791 ATACAAAAAGAG 23802 || || || ||| Sbjct 732003 ATTCAGAAGGAG 732014 >seq155 Length=550677 Score = 96.9 bits (106), Expect = 2e-15 Identities = 131/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 23620 TTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTT 23679 ||||| || ||||||||||| || || ||||| ||||| || || || | ||||| | Sbjct 234367 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATC 234308 Query 23680 GA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTT 23738 || ||| | || | || || ||||| ||||| | ||||| ||||| ||||| | Sbjct 234307 GACAATGTCAAGTC-CAAGATCCAAGACAAGGAAGGCATCCCGCCCGATCAGCAGCGCCT 234249 Query 23739 AATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAA 23798 || || |||||||| || || ||||||| || ||||| |||| |||||||| || || Sbjct 234248 GATCTTCGCCGGCAAGCAGCTTGAAGACGGCCGTACTTTGAGCGACTACAACATCCAGAA 234189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008928522804