Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq195 185 1e-41 >seq195 Length=280307 Score = 185 bits (204), Expect = 1e-41 Identities = 682/1052 (65%), Gaps = 20/1052 (2%) Strand=Plus/Minus Query 53705 GCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 53764 |||| || |||||||| || ||||| ||||||| | | ||| |||| | ||||| Sbjct 69274 GCAAGGGAGGCCAGATTGCACACGGCGACCTCATCGGGAGCCGTGTATTCAACAATCTCG 69215 Query 53765 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 53824 |||||||| || | | |||||| || || || | || || |||||| |||| || Sbjct 69214 GTGCAAAGGTTGGAGCTCCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTGTTGCAG 69155 Query 53825 GCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTC 53884 ||||| || || || ||| | |||||||| ||||| | || | || | ||| || | | Sbjct 69154 GCATCTTTGTAGAGCATGTAAGGCGTACCGGTTTCGGTTTGTGCCTCGAGAATAGCATAC 69095 Query 53885 CAGACGACACGAGCCTTTATTATAGATTTGT-ATCTCTTTTCTC--TTTCGTATAGT--G 53939 |||| ||||||| | || | | | | | ||| | |||||| | Sbjct 69094 CAGAGCTTCTGAGCCTTGAC---AGTCTGGCGACCACGACCCTCCCTCTCGTATTTCTCG 69038 Query 53940 TATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGAC 53999 |||| | || || ||| || || | |||| | | | ||||| |||| |||| Sbjct 69037 TATAGGG-CATTGAA-CTCATCGCCATAGACATCGGCGAGACCAGGTGCCTCATGAGGAC 68980 Query 54000 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 54059 | | | | ||| || || | || || |||| ||| || | |||||| |||| | Sbjct 68979 AGAAGAGTGTCCATTCCTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACA 68920 Query 54060 GAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 54118 || ||| || | || | | ||| || || || || |||||| | || | Sbjct 68919 AGGC-ATAGAACAAGTCCCGTGCTCTGACCTCTTCTTTGCCATGGTTCTTTCTCAGGTTC 68861 Query 54119 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGT 54178 || || | | | || | ||||| || || | ||| || | | | || || || Sbjct 68860 AGAAAGTCGAACACGTCCGCGTGCCATGGCTCGAGGTAGATAGCAAAGGCACCTGGACGC 68801 Query 54179 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 54238 ||||| || |||||||| | ||| | || || || || | || | | ||| || || Sbjct 68800 TTGTTGCCGCCCTGATCAACGTAGCGTGCTGTATTGTTGAAGACACGAAGCATGGGGATC 68741 Query 54239 ATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTA 54298 | ||||| || | ||||||||| || | |||||| ||| |||| ||||| | | Sbjct 68740 AGGCCATTAGAGGTACCATTGGTGCCTGCAATATAGGATCCTGTGGCTCGAATGCAATGA 68681 Query 54299 --ATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTAT 54356 ||||| |||| || || || || | || ||||| | ||||| || | || | Sbjct 68680 GCATTGA--GACCAATACCTCCAGCTGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGT 68623 Query 54357 CATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 54416 |||| |||||||| ||||| || ||| |||||| | | ||| || |||| ||| Sbjct 68622 CATATATGCCCTCGATACTGTCTTCCTTCATGTCGATCAAAAAGCATGAGGACAGTTGAG 68563 Query 54417 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA 54476 | || || || ||||| || | || || |||||||| || || || |||| || | Sbjct 68562 GTTGAGGTGTGCCGGCATTGAACAGTGTCGGTGAAGCGTGGGTGAAGCACTTTTGGGACA 68503 Query 54477 GTAGATTGTACGTCTCGATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACA 54535 || || ||||||||||| || || | ||| || | || || || ||||| ||| Sbjct 68502 TGAGGTTATACGTCTCGATGGCCTTTTCAACATCATCACCG-TGGATGCCGACTGCCACA 68444 Query 54536 CGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGAT 54595 ||||| | |||||| ||||||| || ||| || ||| || || || | ||| ||| Sbjct 68443 CGCATGAGCATGTGTTGAGGTCGCTCGGCGACCTGCTTGCCAATCTTGAGGAGGTATGAT 68384 Query 54596 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACT 54655 | ||||| || || || ||||| || | ||| |||||||| || || | ||| | Sbjct 68383 CTCTCCAACGTCTTGAACCCAAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATTGCC 68324 Query 54656 GAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAATCGG 54714 ||||||| | ||| || | | || |||| | | | | ||| ||||| || || Sbjct 68323 GAGTTGAACTCATCGGCATGCCTCATGAC-ACATTCGTAGGTCTCCTTGGAAATCATGGG 68265 Query 54715 AGAATGTTTCCCATTTTTAGGATTGACATAGT 54746 || |||| ||||||| ||||||||||||| Sbjct 68264 GGAGGGTTTGTCATTTTTGGGATTGACATAGT 68233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593719685247840