Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq185 129 6e-25 seq61 125 7e-24 seq101 123 3e-23 seq42 96.9 4e-15 >seq185 Length=319224 Score = 129 bits (142), Expect = 6e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| |||||||| || ||||| || ||||| || ||||| |||| || ||| | | Sbjct 77856 ATGCAGATATTCGTTAAGACGCTTACCGGCAAGACGATCACGCTCGAGGTTGAATCGAGT 77797 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| || ||||| || ||||||| Sbjct 77796 GACACCATCGACAACG-TCAAGAGCAAGATCCAAGACAAGGAAGGCATTCCTCCGGACCA 77738 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| || |||| || ||||| || |||| |||| || |||||| ||||||||| Sbjct 77737 ACAACGTCTGATCTTTGCTGGCAAGCAATTGGAAGACGGCCGTACCCTCTCCGACTACAA 77678 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || ||||| || Sbjct 77677 CATCCAGAAGGAATCAACCCTCCATCTCGT 77648 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| |||||||| | || ||||| ||| | Sbjct 78084 ATGCAGATCTTCGTCAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAGC 78025 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || |||| ||||| || ||||| ||| |||| || Sbjct 78024 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGCATTCCCCCGGATCAA 77965 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | ||| |||||||| || || || | || ||| | | |||||| ||| Sbjct 77964 CAGCGTCTCATTTTCGCCGGCAAACAACTTGAAGATGGCCGTACCTTGAGCGACTATAAC 77905 Query 40870 ATCCAGAAGGA 40880 ||||||||||| Sbjct 77904 ATCCAGAAGGA 77894 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| ||||| || || || || || ||||| || || || | || || ||| | | Sbjct 77628 ATGCAGATATTTGTCAAGACACTTACTGGCAAGACGATTACACTGGAAGTGGAAAGCTCA 77569 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || |||| ||||| ||||| || || | ||||| Sbjct 77568 GACACGATCGACAACG-TCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCGCCCGACCA 77510 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||||| |||| || ||||||||| |||| |||| || || || |||||||| Sbjct 77509 ACAGCGACTGATCTTTGCCGGCAAACAGTTGGAGGACGGACGAACACTGTCGGACTACAA 77450 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||| ||||||||| ||| ||||| Sbjct 77449 CATTCAGAAGGAGAGCACCCTGCA 77426 >seq61 Length=40645 Score = 125 bits (138), Expect = 7e-24 Identities = 224/327 (69%), Gaps = 0/327 (0%) Strand=Plus/Plus Query 116870 ATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCG 116929 ||||||||| | ||||| || ||||| || || ||||| || ||| | | Sbjct 24388 ATGGAGAACATTCACTCTGAGATGTACAGTCTTCTGATTGACACCTATGTGAAGGATCCC 24447 Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 | |||||| | |||| ||||| |||| ||||| || ||| | |||| || Sbjct 24448 AAAGAGAAGACGTATCTGTTTGACGCCGTCGACACGATCCCTTGCATTCGCAAGAAAGCA 24507 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 || ||||| |||| |||||| | | || |||| | ||| | | || ||||| || Sbjct 24508 GACTGGGCTTTGCGATGGATCTCAGACAAAGAGTCGAGCTTTGCTCAACGTCTGGTTGCT 24567 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 ||||| || ||||| ||| ||||||| || || || || |||| || ||||| ||| Sbjct 24568 TTCGCTGCTGTCGAAGGCATCTTCTTCTCTGGATCGTTTGCATCCATCTTCTGGCTGAAG 24627 Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 | || |||||||| ||||| || ||| ||||||||||||||| | || ||||| Sbjct 24628 AGCAAGGGTCTCATGCCTGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGC 24687 Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTG 117196 ||||| |||||||| || ||||| Sbjct 24688 ATGCATACGGACTTTGCATGCCTGCTG 24714 >seq101 Length=409543 Score = 123 bits (136), Expect = 3e-23 Identities = 136/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || ||||||||||| ||||||||| |||| ||||| | |||||| | Sbjct 84765 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATC 84824 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || |||| ||||| || |||||||| | |||||||| ||| | Sbjct 84825 GACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGCATCCCACCTGACCAGCAGCGATTG 84884 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| || || || || | |||||||| | ||||||||| ||||||||| Sbjct 84885 ATCTTCGCCGGCAAGCAACTTGAGGATGGCCGCACCCTGAGCGACTACAATATCCAGAAG 84944 Query 40879 G 40879 | Sbjct 84945 G 84945 >seq42 Length=56582 Score = 96.9 bits (106), Expect = 4e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| || || || ||| | ||||||||||| || |||| ||| ||||| || || || Sbjct 29252 GACAAGGAAGGGATTCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 29311 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||| ||||| ||| ||||||||||||||||||||| |||| || || || || Sbjct 29312 GACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAATCCACCCTCCACCTGGT 29367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217538418080