Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq185 118 9e-22 seq195 102 7e-17 seq101 89.7 4e-13 >seq185 Length=319224 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 |||||||| | | | |||||||| | ||||| || || || ||||| || |||||| Sbjct 77858 CCTCCGCGGAGACGAAGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAGTCGCTC 77917 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || || ||| || || ||||| || ||| | ||||||||||| ||||| || || Sbjct 77918 AAGGTACGGCCATCTTCAAGTTGTTTGCCGGCGAAAATGAGACGCTGTTGATCCGGGGGA 77977 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||| |||||||| ||| || || || | |||| |||||| || ||||||| Sbjct 77978 ATGCCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 78037 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || | || | || ||||| || || || || || || ||||||||| Sbjct 78038 TCAAGCGTGATGGTCTTGCCAGTAAGTGTCTTGACGAAGATCTGCATG 78085 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 |||||| || | ||||| ||||||||| | || ||| || ||||||||||| || Sbjct 77401 ACCTCCACGCAGTCTCAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCGA 77460 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || || || ||||| | |||||| || || |||| || ||||| || ||||| || Sbjct 77461 CAGTGTTCGTCCGTCCTCCAACTGTTTGCCGGCAAAGATCAGTCGCTGTTGGTCGGGCGG 77520 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || |||||||||||| ||| || || || | |||| ||||| | ||| || || Sbjct 77521 AATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCTGAGCTTTCCAC 77580 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | ||| ||||| || || || || ||||| |||||||| Sbjct 77581 TTCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 77628 >seq195 Length=280307 Score = 102 bits (112), Expect = 7e-17 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 133222 GGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGA-TATACATTCGACGTGAAC 133280 ||||||| ||||| || || || || ||||| || | |||| || | |||||||||| | Sbjct 69843 GGTTGACAACTTGGAATTCTCCCGCCAGAACACGAC-GAGAGTAGATATTCGACGTGTAT 69785 Query 133281 GGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCC 133340 || ||||| |||||||||||||||| || |||| ||||| || || ||||| |||| Sbjct 69784 GGCTCGAAGCATTCGTTGTTGCCGAGAATTTGCGACGTCGAGGCTGTAGGCATCGGCGCC 69725 Query 133341 ACCAACAAAGAGTTTCTTACGCCGTACTTG 133370 || | | |||||| | || || |||||| Sbjct 69724 ACAAGGAGAGAGTTGCGAACACCATACTTG 69695 >seq101 Length=409543 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || || ||||| ||||||| ||||| |||||| || || || || ||| |||| Sbjct 84943 TTCTGGATATTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 84884 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 | |||||||| || || || ||||| ||||||||| ||| || || || | ||| Sbjct 84883 AATCGCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCG 84824 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729 | ||||| | ||||||||||| ||| | || ||||| || || || || || || Sbjct 84823 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 84765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829035874536