Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq185 109 6e-19 seq101 89.7 6e-13 >seq185 Length=319224 Score = 109 bits (120), Expect = 6e-19 Identities = 159/218 (73%), Gaps = 10/218 (5%) Strand=Plus/Plus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 || |||||| |||| ||||||||||| ||||| ||||| || | ||| || || |||| Sbjct 77416 CAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCGACAGTGTTCGTCCGTC 77475 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || | ||| || || || || || |||||||| ||||||| ||| | | |||||||| Sbjct 77476 CTCCAACTGTTTGCCGGCAAAGATCAGTCGCTGTTGGTCGGGCGGAATACCCTCCTTGT- 77534 Query 43091 CATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTG 43145 | ||| | || | |||| ||| | | | |||||| ||| |||||| || | || Sbjct 77535 CTTGAATCTTGGACTTGA-CGTTGTCGATCGTGTCTGAGCT---TTCCACTTCCAGTGTA 77590 Query 43146 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || ||||| || || ||||| ||||| || ||||| Sbjct 77591 ATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 77628 >seq101 Length=409543 Score = 89.7 bits (98), Expect = 6e-13 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || |||||||| || ||| || || | || || || ||||| || ||||| | Sbjct 84945 CCTTCTGGATATTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 84886 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTC 43112 | | |||||||||||| | || | || ||||||| | ||| | || | |||| | Sbjct 84885 TCAATCGCTGCTGGTCAGGTGGGATGCCTTCCTTGT-CTTGAATCTTGGACTTGACATTG 84827 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||| ||| || || |||| |||||||| |||||||| || ||||| || Sbjct 84826 TCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 84767 Query 43173 AAG 43175 ||| Sbjct 84766 AAG 84764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571815755888240