Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq61 123 5e-23 seq195 104 5e-17 >seq61 Length=40645 Score = 123 bits (136), Expect = 5e-23 Identities = 220/318 (69%), Gaps = 11/318 (3%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||| || ||||| || ||||| |||||||| ||| | || |||||||| |||||| Sbjct 24562 GTTGCTTTCGCTGCTGTCGAAGGCATCTTCTTCTCTGGATCGTTTGCATCCATCTTCTGG 24621 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | |||| || |||| | ||||||| ||||||| |||||| ||| |||| ||| | || Sbjct 24622 CTGAAGAGCAAGGGTCTCATGCCTGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGAT 24681 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 || || | ||| |||||||||||| ||||| || || | | || | | | | Sbjct 24682 GAGGGCATGCATACGGACTTTGCATGCCTGCTGATGCAACA----TCTGCAG---CACAA 24734 Query 102098 TCAAGAGAAAGGATTC-TTGAA---ATTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153 | || | | || | ||| ||| | || || || || |||||| | || || Sbjct 24735 GCCCGACCCACAACTCATCGAAAACATTATAACGGAGGCTGTTAAGATTGAAAAGGAGTT 24794 Query 102154 TCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTA 102213 |||||| | | |||| || || ||| | || ||||||| ||| | ||| | ||||| Sbjct 24795 TCTCACCGATGCCCTTCCCGTCGCATTGCTTGGCATGAACTCGAAGCTCATGTGTCAGTA 24854 Query 102214 CATTGAATTTGTGGCAGA 102231 |||||| ||||| || || Sbjct 24855 CATTGAGTTTGTCGCTGA 24872 >seq195 Length=280307 Score = 104 bits (114), Expect = 5e-17 Identities = 174/249 (70%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 |||||||| ||||||||||| || || ||| || || ||||| || ||||| || Sbjct 68665 CCTCCAGCTGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATATATGCCCTCGATA 68606 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGA-CTGTTCCACA 94910 || || || | | | | | | ||||| ||||| ||||| ||| ||| ||| || Sbjct 68605 CTGTCTTCCTTCATGTCGATCAAAAAGCATGAGGACAGTTGAGGT-TGAGGTGTGCCGGC 68547 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 ||| |||||||| || ||||| ||||| || | | |||||||| | ||| || || Sbjct 68546 ATTGAACAGTGTCGGTGAAGCGTGGGTGAAGCACTTTTGGGACATGAGGTTATACGTCTC 68487 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030 ||| | || | || ||||| |||||||| ||||||||||| | ||||| || Sbjct 68486 GATGGCCTTTTCAACATCATCACCGTGGATGCCGACTGCCACACGCATGAGCATGTGTTG 68427 Query 95031 AGGGCGCTC 95039 ||| ||||| Sbjct 68426 AGGTCGCTC 68418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989580728806390