Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq195 188 9e-43 >seq195 Length=280307 Score = 188 bits (208), Expect = 9e-43 Identities = 685/1053 (65%), Gaps = 22/1053 (2%) Strand=Plus/Minus Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 65795 |||| || |||||||| || ||||| ||||||| | | ||| |||| | ||||| Sbjct 69274 GCAAGGGAGGCCAGATTGCACACGGCGACCTCATCGGGAGCCGTGTATTCAACAATCTCG 69215 Query 65796 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 65855 |||||||| || | | |||||| || || || | || || |||||| |||| || Sbjct 69214 GTGCAAAGGTTGGAGCTCCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTGTTGCAG 69155 Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915 ||||| || || || ||| | || ||||| ||||| | || | || | ||| || | | Sbjct 69154 GCATCTTTGTAGAGCATGTAAGGCGTACCGGTTTCGGTTTGTGCCTCGAGAATAGCATAC 69095 Query 65916 CAGACGACTC-GAGCCTTTATTATAGATTTGT-ATCTCTTTTCTC--TTTCGTATAGT-- 65969 |||| | || ||||||| | || | | | | | ||| | |||||| Sbjct 69094 CAGA-GCTTCTGAGCCTTGAC---AGTCTGGCGACCACGACCCTCCCTCTCGTATTTCTC 69039 Query 65970 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGA 66029 ||||| | || |||||| || || | |||| | | | ||||| |||| ||| Sbjct 69038 GTATAGGG-CATT-GAACTCATCGCCATAGACATCGGCGAGACCAGGTGCCTCATGAGGA 68981 Query 66030 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 66089 || | | | ||| || || | || || |||| ||| || | |||||| |||| Sbjct 68980 CAGAAGAGTGTCCATTCCTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCAC 68921 Query 66090 AGAGCTATA-AATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 66148 | || ||| || || || | | ||| || || || || |||||| | || | Sbjct 68920 AAGGC-ATAGAACAAGTCCCGTGCTCTGACCTCTTCTTTGCCATGGTTCTTTCTCAGGTT 68862 Query 66149 GAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 66208 || || | | | || ||||| || || | ||| || || | | || || || Sbjct 68861 CAGAAAGTCGAACACGTCCGCGTGCCATGGCTCGAGGTAGATAGCAAAGGCACCTGGACG 68802 Query 66209 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 66268 ||||| || |||||||| | ||| | || || || || | || | | ||| || || Sbjct 68801 CTTGTTGCCGCCCTGATCAACGTAGCGTGCTGTATTGTTGAAGACACGAAGCATGGGGAT 68742 Query 66269 AATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTA 66326 | ||||| || ||||||||||| || | |||||| ||| | || ||||| | | Sbjct 68741 CAGGCCATTAGAGGTACCATTGGTGCCTGCAATATAGGATCCTGTGGCTCGAATGCAATG 68682 Query 66327 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 66386 |||| ||||| || || || || | || ||||| | ||||| || | || Sbjct 68681 AGCATTG--AGACCAATACCTCCAGCTGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTG 68624 Query 66387 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 66446 ||||| |||||||| ||||| || ||| |||||| | | ||| || |||| ||| Sbjct 68623 TCATATATGCCCTCGATACTGTCTTCCTTCATGTCGATCAAAAAGCATGAGGACAGTTGA 68564 Query 66447 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 66506 | || || || ||||| || | || || |||||||| || || || |||| || Sbjct 68563 GGTTGAGGTGTGCCGGCATTGAACAGTGTCGGTGAAGCGTGGGTGAAGCACTTTTGGGAC 68504 Query 66507 AGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGAC 66565 | || || |||||||| || || || | ||| || | || || || ||||| || Sbjct 68503 ATGAGGTTATACGTCTCGATGGCCTTTTCAACATCATCACCG-TGGATGCCGACTGCCAC 68445 Query 66566 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGA 66625 |||||| | |||||| ||||||| || ||| || ||| || || | | ||| || Sbjct 68444 ACGCATGAGCATGTGTTGAGGTCGCTCGGCGACCTGCTTGCCAATCTTGAGGAGGTATGA 68385 Query 66626 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 66685 | | ||||| || || || ||||| || | ||| |||||||| || || | ||| | Sbjct 68384 TCTCTCCAACGTCTTGAACCCAAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATTGC 68325 Query 66686 CGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAATCG 66744 |||||||| | ||| || | | || |||| | | | | ||| ||||| || | Sbjct 68324 CGAGTTGAACTCATCGGCATGCCTCATGAC-ACATTCGTAGGTCTCCTTGGAAATCATGG 68266 Query 66745 GAGAATGTTTCCCATTTTTAGGATTGACATAGT 66777 | || |||| ||||||| ||||||||||||| Sbjct 68265 GGGAGGGTTTGTCATTTTTGGGATTGACATAGT 68233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658170677392720