Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq185 87.8 2e-12 seq195 82.4 8e-11 >seq185 Length=319224 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 |||||| | || || |||||| ||||||||||||| || || ||||| |||||||| || Sbjct 77701 GTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGGTCCGGAGGAATGCCTTCCTT 77760 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || | | || | ||||| | | || ||||| | || | Sbjct 77761 GTCTTGGATCTTGCTCTTGACGTTGTCGATGGTGTCACTCGATTCAACCTCGAGCGTGAT 77820 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||||||| | ||| || |||||||| ||||| Sbjct 77821 CGTCTTGCCGGTAAGCGTCTTAACGAATATCTGCAT 77856 >seq195 Length=280307 Score = 82.4 bits (90), Expect = 8e-11 Identities = 248/375 (66%), Gaps = 6/375 (2%) Strand=Plus/Minus Query 154107 TTGCCGCCCTGATTTACGTGACGCACCATATTGTTGAAAACCCGAAGCATGGGTAGCAGA 154166 ||||||||||||| |||| || | |||||||||| || ||||||||||| | ||| Sbjct 68797 TTGCCGCCCTGATCAACGTAGCGTGCTGTATTGTTGAAGACACGAAGCATGGGGATCAGG 68738 Query 154167 CCGCTGGCGGTACCGTTTGTAGATTTAATCT-TGCTGTTGCGGCCTCGAACGCTGTTTAC 154225 || | | |||||| || || | ||| | | | || || |||||| || | | Sbjct 68737 CCATTAGAGGTACCATTGGTGCCTGCAATATAGGATCCTGTGG-CTCGAATGCAATGAGC 68679 Query 154226 GTTTAATCCAATACCGCC-GCCGTGTTTGGAGATCATGGCGCAATCGTTCAATGTGTTAT 154284 || | |||||||| || || || ||||||||||||||||| || | |||| || Sbjct 68678 ATTGAGACCAATACCTCCAGCTGT-CTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCAT 68620 Query 154285 AGATACCACGAATGCTATCGCTTTCCATGGTCAAT-AGGAAACATGAACTCATCTGCGGA 154343 | || || || || || | ||| ||| || | || ||||| || || || Sbjct 68619 ATATGCCCTCGATACTGTCTTCCTTCAT-GTCGATCAAAAAGCATGAGGACAGTTGAGGT 68561 Query 154344 GTTGGAGTGCCGGCAGCAAACATGGTCGGGCTTGCGTGCGTGTACATCTTTGTGCTCAAA 154403 || ||||||||| |||| ||||| ||||| ||| | |||| | || Sbjct 68560 TGAGGTGTGCCGGCATTGAACAGTGTCGGTGAAGCGTGGGTGAAGCACTTTTGGGACATG 68501 Query 154404 AATTTATAAGACTTTATGGCATTATCAATGTCGTCTCCAAAGATACCTAGAGCTATACGC 154463 | ||||| | || ||||| || |||| || || || ||| || | || | |||| Sbjct 68500 AGGTTATACGTCTCGATGGCCTTTTCAACATCATCACCGTGGATGCCGACTGCCACACGC 68441 Query 154464 ATGTGCATGTGTTGA 154478 ||| ||||||||||| Sbjct 68440 ATGAGCATGTGTTGA 68426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496062400193600