Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq195 183 4e-41 >seq195 Length=280307 Score = 183 bits (202), Expect = 4e-41 Identities = 677/1045 (65%), Gaps = 18/1045 (2%) Strand=Plus/Minus Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680 || |||||||| || ||||| ||||||| | | ||| |||| | || || ||||| Sbjct 69268 GAGGCCAGATTGCACACGGCGACCTCATCGGGAGCCGTGTATTCAACAATCTCGGTGCAA 69209 Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740 ||||| | | ||||| || || || | || || |||||| |||| || ||||| Sbjct 69208 AGGTTGGAGCTCCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTGTTGCAGGCATCT 69149 Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 79800 || || || ||| | || ||||| ||||| | || | || | ||| || | ||||| | Sbjct 69148 TTGTAGAGCATGTAAGGCGTACCGGTTTCGGTTTGTGCCTCGAGAATAGCATACCAGA-G 69090 Query 79801 ACTC-GAGCCTTTATTATAGACTTGT-ATCTCTTTTCTC--TTTCGTATTGTGTATATAA 79856 || ||||||| | || || | | | | ||| | ||||||| |||| Sbjct 69089 CTTCTGAGCCTTGAC---AGTCTGGCGACCACGACCCTCCCTCTCGTATTTCTCGTATAG 69033 Query 79857 TCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAA 79916 | |||||| || || | |||||| | | ||||| || | |||||| | | Sbjct 69032 GGCATTGAACTCATCGCCATAGACATCGGCGAGACCAGGTGCCTCATGAGGACAGAAGAG 68973 Query 79917 CGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 79976 | ||| || | | || || |||| ||| || | |||||| |||| | || || Sbjct 68972 TGTCCATTCCTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAAGGC-AT 68914 Query 79977 A-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 80035 | || | || | | ||| ||| || || || |||||| | || | || || Sbjct 68913 AGAACAAGTCCCGTGCTCTGACCTCTTCTTTGCCATGGTTCTTTCTCAGGTTCAGAAAGT 68854 Query 80036 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTC 80095 | | | || | ||||| || || | ||| || || | | || || || ||||| | Sbjct 68853 CGAACACGTCCGCGTGCCATGGCTCGAGGTAGATAGCAAAGGCACCTGGACGCTTGTTGC 68794 Query 80096 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 80155 | |||||||| | ||| | || || || || | || | | ||| || || | |||| Sbjct 68793 CGCCCTGATCAACGTAGCGTGCTGTATTGTTGAAGACACGAAGCATGGGGATCAGGCCAT 68734 Query 80156 TGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGA 80213 | || ||||||||||| || | |||||| ||| |||| ||||| | | |||| Sbjct 68733 TAGAGGTACCATTGGTGCCTGCAATATAGGATCCTGTGGCTCGAATGCAATGAGCATTG- 68675 Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273 ||||| || || || || | || ||||| | ||||| || | || ||||| || Sbjct 68674 -AGACCAATACCTCCAGCTGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATATAT 68616 Query 80274 GCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 80333 |||||| || || || || |||||| | | ||| || |||| ||| | || Sbjct 68615 GCCCTCGATACTGTCTTCCTTCATGTCGATCAAAAAGCATGAGGACAGTTGAGGTTGAGG 68556 Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393 || || ||||| || | || || |||||||| || || || |||| |||| || || Sbjct 68555 TGTGCCGGCATTGAACAGTGTCGGTGAAGCGTGGGTGAAGCACTTTTGGGACATGAGGTT 68496 Query 80394 GTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCGCGACACGCATTA 80452 |||||||| || || ||| | ||| || | || || || || || |||||||| | Sbjct 68495 ATACGTCTCGATGGCCTTTTCAACATCATCACCG-TGGATGCCGACTGCCACACGCATGA 68437 Query 80453 ACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCA 80512 |||||| ||||||| || ||| || || || || | | ||| ||| | |||| Sbjct 68436 GCATGTGTTGAGGTCGCTCGGCGACCTGCTTGCCAATCTTGAGGAGGTATGATCTCTCCA 68377 Query 80513 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 80572 | || || || ||||| || | ||| |||||||| || || | ||| ||||||||| Sbjct 68376 ACGTCTTGAACCCAAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATTGCCGAGTTGA 68317 Query 80573 GTTTATCCTTATATTTGTTAACTACATCCATGGTGATACTT-GAAATAATCGGAGAATGT 80631 | ||| || | | || |||| | | | | ||| ||||| || || || || Sbjct 68316 ACTCATCGGCATGCCTCATGAC-ACATTCGTAGGTCTCCTTGGAAATCATGGGGGAGGGT 68258 Query 80632 TTCCCATTTTTAGGATTAACATAGT 80656 || ||||||| ||||| ||||||| Sbjct 68257 TTGTCATTTTTGGGATTGACATAGT 68233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266483583120