Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq61 159 5e-34 seq195 138 2e-27 >seq61 Length=40645 Score = 159 bits (176), Expect = 5e-34 Identities = 350/514 (68%), Gaps = 19/514 (4%) Strand=Plus/Plus Query 125244 TTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTAC 125303 || ||| ||||||| |||||| | ||||| || |||||| | |||||||||| || Sbjct 24376 TTTCAAGTCATGATGGAGAACATTCACTCTGAGATGTACAGTCTTCTGATTGACACCTAT 24435 Query 125304 ATTCGCGATCCGCAACGTAAACACATG-CTCTTTAACGCAATCGACACGGTGCCGTCTAT 125362 | ||||| ||| | || || | || ||| |||| |||||||| | || | || Sbjct 24436 GTGAAGGATCC-CAAAGAGAAGACGTATCTGTTTGACGCCGTCGACACGATCCCTTGCAT 24494 Query 125363 ACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGA 125422 || || || || | |||| | || |||||| ||| | |||| | || | Sbjct 24495 TCGCAAGAAAGCAGACTGGGCTTTGCGATGGATCTCAGACAAAGAGTCGAGCTTTGCTCA 24554 Query 125423 CAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCAT 125482 | ||||| || ||||| || || || ||||||||||| || || ||||| |||| Sbjct 24555 ACGTCTGGTTGCTTTCGCTGCTGTCGAAGGCATCTTCTTCTCTGGATCGTTTGCATCCAT 24614 Query 125483 CTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATC 125542 ||| ||||| |||| || |||||||| || || || | |||||| | || || Sbjct 24615 CTTCTGGCTGAAGAGCAAGGGTCTCATGCCTGGCCTCACCTTCTCCAACGAGCTCATCTC 24674 Query 125543 TCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCC 125602 ||| || |||||| | || |||||||| || ||| | ||||| |||||| Sbjct 24675 TCGTGATGAGGGCATGCATACGGACTTTGCATGCCTGCTGAT--GCAAC-ATCTGC---- 24727 Query 125603 CGAGTGCAGATCCAGCGATGAAAAGGTCATC---AACATTGTAACCGATGCCGTGAGGAT 125659 || || | || ||| | | ||||| |||||| |||| || || || | ||| Sbjct 24728 --AGCACA-AGCC--CGACCCACAACTCATCGAAAACATTATAACGGAGGCTGTTAAGAT 24782 Query 125660 AGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCA-TGATTGGCATGAACTGCAAGC 125718 ||| | |||||||| ||||| |||| || ||| ||| || |||||||||||| |||| Sbjct 24783 TGAAAAGGAGTTTCTCACCGATGCCCTTCCCGTC-GCATTGCTTGGCATGAACTCGAAGC 24841 Query 125719 TAATGTGCGAGTACATAGAGTTTGTGGCAGATCG 125752 | ||||| ||||||| |||||||| || || || Sbjct 24842 TCATGTGTCAGTACATTGAGTTTGTCGCTGACCG 24875 >seq195 Length=280307 Score = 138 bits (152), Expect = 2e-27 Identities = 335/500 (67%), Gaps = 8/500 (2%) Strand=Plus/Plus Query 96862 CACGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAAC 96921 |||| |||||| ||||||||||| || || ||||| || | || ||||| | || | Sbjct 68773 CACGCTACGTTGATCAGGGCGGCAACAAGCGTCCAGGTGCCTTTGCTATCTACCTCGAGC 68832 Query 96922 CTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGG 96981 | |||||||||||||| || |||||| | | || | || ||| |||| ||||||| Sbjct 68833 CATGGCACGCGGACGTGTTCGACTTTCTGAACCTGAGAAAGAACCATGGCAAAGAAGAGG 68892 Query 96982 CACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC- 97040 |||| |||||||||| ||||| | ||| || || ||||||||| | || ||| Sbjct 68893 TCAGAGCACGGGACTTGTTCTATGCCTTGTGGACTCCTGACTTGTTCATGGAACGTGTCG 68952 Query 97041 -AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTG 97099 | || || | |||| || | || || | | |||| ||||| ||||| Sbjct 68953 AGAAGAACCAGG--AATGGACACTCTTCTGTCCTCATGAGGCACCTGGTCTCGCCGATGT 69010 Query 97100 CTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGA 97158 || ||||| ||||| | ||| ||| | |||||| ||||| || || | Sbjct 69011 CTATGGCGATGAGTTCAATGCCCTATACGAGAAATACGAGAGGGAGGGTCGTGGTCGCCA 69070 Query 97159 GACGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGA 97217 ||| ||| | || | |||| || ||| | || || | ||| || || || || Sbjct 69071 GAC-TGTCAAGGCTC-AGAAGCTCTGGTATGCTATTCTCGAGGCACAAACCGAAACCGGT 69128 Query 97218 ACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGC 97277 || || ||||| |||||||| ||| || || | || |||||||| ||||||| Sbjct 69129 ACGCCTTACATGCTCTACAAAGATGCCTGCAACAGAAAGAGCAACCAGAAGAACTTGGGT 69188 Query 97278 ACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACG 97337 |||||| | ||||||| || ||||| || ||||| || ||| | |||| || ||| Sbjct 69189 ACCATCCGGAGCTCCAACCTTTGCACCGAGATTGTTGAATACACGGCTCCCGATGAGGTC 69248 Query 97338 GCAGTTTGCGTTCTGGCATC 97357 || || ||| |||||| || Sbjct 69249 GCCGTGTGCAATCTGGCCTC 69268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741056810084080