Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq185 143 6e-29 >seq185 Length=319224 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| ||||| || |||||||| | || | || ||||| |||||||| || Sbjct 77888 GTAGATTCCTTCTGGATGTTATAGTCGCTCAAGGTACGGCCATCTTCAAGTTGTTTGCCG 77947 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| || | ||||||||| || || || ||||| || ||||||||||| | || Sbjct 77948 GCGAAAATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTCCTGAATCTTGGACTTG 78007 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| ||||| | || ||||| || || || ||||| ||||||||||| Sbjct 78008 ACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGCGTGATGGTCTTGCCAGTAAGTGTC 78067 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 78068 TTGACGAAGATCTGCAT 78084 Score = 131 bits (144), Expect = 4e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 |||| || || ||||| | || ||||| ||||| || || ||||| || || || | Sbjct 77639 AGCCGGAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGG 77698 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 |||||||| | ||| || |||||||| || || | ||||| || ||||| || ||||| Sbjct 77699 CCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGGTCCGGAGGAATGCCTTCC 77758 Query 104462 TTATCCTGAATCTTTGCTTTT-ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGT 104520 || || || ||||| ||| || || || || | ||| || || | ||| ||||| || || Sbjct 77759 TTGTCTTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCACTCGATTCAACCTCGAGCGT 77817 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || ||||| || || || ||||||||||| Sbjct 77818 GATCGTCTTGCCGGTAAGCGTCTTAACGAATATCTGCAT 77856 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || |||||||| || ||||| || || |||| ||||| || | ||||| || ||||| Sbjct 77438 TCCTTCTGAATGTTGTAGTCCGACAGTGTTCGTCCGTCCTCCAACTGTTTGCCGGCAAAG 77497 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | |||||| || || || || || || || || |||||||| | || || || Sbjct 77498 ATCAGTCGCTGTTGGTCGGGCGGAATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTG 77557 Query 104489 TCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTT 104545 || | || || ||| ||| || || |||||||| ||||| ||||||||||| || Sbjct 77558 TCGATCGTGTCTGAGCT---TTCCACTTCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTG 77614 Query 104546 ACAAATATCTGCAT 104559 |||||||||||||| Sbjct 77615 ACAAATATCTGCAT 77628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151394593908664