Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq185 131 2e-25 >seq185 Length=319224 Score = 131 bits (144), Expect = 2e-25 Identities = 160/215 (74%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||||||||||| || | |||||| ||||||| || | ||| || Sbjct 77876 ACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAGTCGCTCAAGGTACGGCCATCTTCA 77935 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || ||||| ||| | || || | | || ||||| || ||||| ||||| ||||| | | Sbjct 77936 AGTTGTTTGCCGGCGAAAATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTCCTGA 77995 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTTT 94976 || || | |||||| | ||| ||||| || ||| ||||| |||| ||||||||| | Sbjct 77996 ATCTTGGACTTGACATTGTCGATGGTGTC-GC-TGGACTCGACCTCAAGCGTGATGGTCT 78053 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011 | |||||||| || || || |||||||||||| || Sbjct 78054 TGCCAGTAAGTGTCTTGACGAAGATCTGCATGATT 78088 Score = 105 bits (116), Expect = 6e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | || || || ||||||||||| || ||||| || | ||| || | | Sbjct 77402 CCTCCACGCAGTCTCAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGT--CCG 77459 Query 94841 ATAGTGTTGG--AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | |||||| | ||||||| |||||| ||| ||||||| | || || || || || | Sbjct 77460 ACAGTGTTCGTCCGTCCTCCAACTGTTTGCCGGCAAAGATCAGTCGCTGTTGGTCGGGCG 77519 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 ||||||| || ||||| | ||| || | ||||||| | ||| ||||| | | || | Sbjct 77520 GAATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCTGAGCTTTCCA 77579 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | || || || || |||||||| || || ||||| |||||||| Sbjct 77580 CTTCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 77628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448289754260880