Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq101 150 3e-32 seq197 131 3e-26 >seq101 Length=409543 Score = 150 bits (166), Expect = 3e-32 Identities = 159/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || || || || |||| ||| |||||| || ||||||||||| ||||||||||| || || Sbjct 188742 GCCAAACGCCACCGCAAGAT-TCTTCGTGACAACATCCAAGGTATCACCAAGCCTGCCAT 188800 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| ||||||||||| || ||||||||| |||| | || |||| ||||||| Sbjct 188801 CCGACGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCGGCCATGATCTACGAAGAGAC 188860 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | ||| ||||||| | | || || | ||| ||| || ||| ||||| Sbjct 188861 CCGGGGTGTCCTCAAGTCCTTCCTCGAATCGGTCATTCGTGACGCTGTCACCTACACCGA 188920 Query 16612 GCACGCTAAACGTAAGACTGTCACCTC 16638 |||||| || | ||||||||||| || Sbjct 188921 GCACGCAAAGAGAAAGACTGTCACTTC 188947 >seq197 Length=273696 Score = 131 bits (144), Expect = 3e-26 Identities = 132/169 (78%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||| || || || | ||| |||||| || ||||||||||| ||||||||||| ||||| Sbjct 253477 GCTAAACGCCACCGAAAGAT-TCTTCGTGACAACATCCAAGGTATCACCAAGCCCGCTAT 253535 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||| || ||||||||||| ||||||||| |||| | || |||| ||||||| Sbjct 253536 TCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCAGCCATGATCTACGAAGAGAC 253595 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTC 16600 |||| ||| | |||| |||||| | ||||||| ||||||| || Sbjct 253596 CCGTGGTGTCCTCAAGACCTTCCTGGAAGGTGTTATCCGTGATGCTGTC 253644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074964108794