Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18]
258 sequences; 33,787,447 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq185 107 2e-18
>seq185
Length=319224
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || || ||||| |||| ||||| ||| |||||| || ||||||||||| | |
Sbjct 77402 CCTCCACGCAGTCTCAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCGAC 77461
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| |||||||||| |||||||| ||| | || || ||||||||||| ||
Sbjct 77462 AGTGTTCGTCCGTCCTCCAACTGTTTGCCGGCAAAGATCAGTCGCTGTTGGTCGGGCGGA 77521
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| ||||| ||||| ||| | ||| || | | | | ||||| | ||| |
Sbjct 77522 ATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCTGAGCTTTCCACT 77581
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| || || || || || || || || |||||||| ||||||||
Sbjct 77582 TCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 77628
Score = 102 bits (112), Expect = 7e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || |||| || || | ||| || || || ||||| || |||||||||||||
Sbjct 77630 CCTCCGCGAAGCCGGAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAG 77689
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | |||| |||||||| ||||| ||| | || || || ||||||||| |||
Sbjct 77690 AGGGTACGGCCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGGTCCGGAGGA 77749
Query 16829 ACGCCCTCTTTGTC-GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887
| ||| || ||||| | | ||||| ||| || | | | | ||||| | | ||
Sbjct 77750 ATGCCTTCCTTGTCTTGGATCTTGCT-CTTGACGTTGTCGATGGTGTCACTCGATTCAAC 77808
Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | ||||| || || ||||| ||||| || || || ||||||||
Sbjct 77809 CTCGAGCGTGATCGTCTTGCCGGTAAGCGTCTTAACGAATATCTGCAT 77856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405086726251420
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |