Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq228 140 2e-28 seq185 114 9e-21 >seq228 Length=151836 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 143529 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 143470 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 143469 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 143435 >seq185 Length=319224 Score = 114 bits (126), Expect = 9e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 || |||||| || || ||||||||||| ||||| ||||| || |||| ||| |||| Sbjct 77416 CAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCGACAGTGTTCGTCCGTC 77475 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || || ||||| |||||||| || || || ||||| |||| || | || || ||||| Sbjct 77476 CTCCAACTGTTTGCCGGCAAAGATCAGTCGCTGTTGGTCGGGCGGAATACCCTCCTTGTC 77535 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 ||| || ||| || || | || || ||| ||||| ||||| | |||||| || Sbjct 77536 TTGAATCTTGGACTTGACGTTGTCGATCGTGTCTGAGCTTTCCACTTCCAGTGTAATCGT 77595 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || | || || || ||||||||||| Sbjct 77596 CTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 77628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946146800398