Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq195 197 2e-45 >seq195 Length=280307 Score = 197 bits (218), Expect = 2e-45 Identities = 687/1053 (65%), Gaps = 22/1053 (2%) Strand=Plus/Minus Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62806 |||| || |||||||| || ||||| ||||||| | | ||| |||| | ||||| Sbjct 69274 GCAAGGGAGGCCAGATTGCACACGGCGACCTCATCGGGAGCCGTGTATTCAACAATCTCG 69215 Query 62807 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 62866 |||||||| || | | |||||| || || || | || || |||||| |||| || Sbjct 69214 GTGCAAAGGTTGGAGCTCCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTGTTGCAG 69155 Query 62867 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 62926 ||||| || || || ||| | || ||||| ||||| | || | || | ||| || | | Sbjct 69154 GCATCTTTGTAGAGCATGTAAGGCGTACCGGTTTCGGTTTGTGCCTCGAGAATAGCATAC 69095 Query 62927 CAGACGACTC-GAGCCTTTATTATAGATTTGT-ATCTCTTTTCTC--TTTCGTATAGT-- 62980 |||| | || ||||||| | || | | | | | ||| | |||||| Sbjct 69094 CAGA-GCTTCTGAGCCTTGAC---AGTCTGGCGACCACGACCCTCCCTCTCGTATTTCTC 69039 Query 62981 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGA 63040 ||||| | || |||||| || || | |||| | | || ||||| |||| ||| Sbjct 69038 GTATAGGG-CATT-GAACTCATCGCCATAGACATCGGCGAGACCAGGTGCCTCATGAGGA 68981 Query 63041 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63100 || | | | ||| || || | || || |||| ||| || | |||||| |||| Sbjct 68980 CAGAAGAGTGTCCATTCCTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCAC 68921 Query 63101 AGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63159 | || ||| || | || | | ||| || || || || |||||| | || | Sbjct 68920 AAGGC-ATAGAACAAGTCCCGTGCTCTGACCTCTTCTTTGCCATGGTTCTTTCTCAGGTT 68862 Query 63160 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63219 || || | | | || | ||||| || || | ||| || || | | || || || Sbjct 68861 CAGAAAGTCGAACACGTCCGCGTGCCATGGCTCGAGGTAGATAGCAAAGGCACCTGGACG 68802 Query 63220 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63279 ||||| || |||||||| | ||| | || || || || | || | | ||| || || Sbjct 68801 CTTGTTGCCGCCCTGATCAACGTAGCGTGCTGTATTGTTGAAGACACGAAGCATGGGGAT 68742 Query 63280 AATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTA 63337 | ||||| || ||||||||||| |||| |||||| ||| |||| ||||| | | Sbjct 68741 CAGGCCATTAGAGGTACCATTGGTGCCTGCAATATAGGATCCTGTGGCTCGAATGCAATG 68682 Query 63338 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 63397 |||| ||||| || || || || | || ||||| | ||||| || | || Sbjct 68681 AGCATTG--AGACCAATACCTCCAGCTGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTG 68624 Query 63398 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 63457 ||||| |||||||| ||||| || ||| |||||| | | ||| || |||| ||| Sbjct 68623 TCATATATGCCCTCGATACTGTCTTCCTTCATGTCGATCAAAAAGCATGAGGACAGTTGA 68564 Query 63458 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAA 63517 | || || || ||||| || | || || |||||||| || || || |||| || Sbjct 68563 GGTTGAGGTGTGCCGGCATTGAACAGTGTCGGTGAAGCGTGGGTGAAGCACTTTTGGGAC 68504 Query 63518 AGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGAC 63576 | || || |||||||| || || || | ||| || | || || || ||||| || Sbjct 68503 ATGAGGTTATACGTCTCGATGGCCTTTTCAACATCATCACCG-TGGATGCCGACTGCCAC 68445 Query 63577 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGA 63636 |||||| | |||||| ||||||| || ||| || ||| || || | | ||| || Sbjct 68444 ACGCATGAGCATGTGTTGAGGTCGCTCGGCGACCTGCTTGCCAATCTTGAGGAGGTATGA 68385 Query 63637 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 63696 | | ||||| || || || ||||| || | ||| |||||||| || || | ||| | Sbjct 68384 TCTCTCCAACGTCTTGAACCCAAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATTGC 68325 Query 63697 CGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAATAG 63755 |||||||| | ||| || | | || |||| | | | | ||| ||||| || | Sbjct 68324 CGAGTTGAACTCATCGGCATGCCTCATGAC-ACATTCGTAGGTCTCCTTGGAAATCATGG 68266 Query 63756 GAAAATGTTTCCCATTTTTAGGATTGACATAGT 63788 | | |||| ||||||| ||||||||||||| Sbjct 68265 GGGAGGGTTTGTCATTTTTGGGATTGACATAGT 68233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633629956536800