Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq101 104 2e-17 seq185 100 2e-16 >seq101 Length=409543 Score = 104 bits (114), Expect = 2e-17 Identities = 135/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| | || || || ||||||| |||| || |||||||| ||||| ||| Sbjct 84765 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATC 84824 Query 25068 GAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124 || || || ||| | || | ||| ||||| ||||| || ||||||||||| ||||| Sbjct 84825 GA--CAATGTCAAGTCCAAGATTCAA-GACAAGGAAGGCATCCCACCTGACCAGCAGCGA 84881 Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184 | || || |||||||| ||| | || |||| ||||| || |||| |||||||| || Sbjct 84882 TTGATCTTCGCCGGCAAGCAACTTGAGGATGGCCGCACCCTGAGCGACTACAATATCCAG 84941 Query 25185 AA 25186 || Sbjct 84942 AA 84943 >seq185 Length=319224 Score = 100 bits (110), Expect = 2e-16 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| ||||| | || || || | || ||| | |||||||| || Sbjct 77628 ATGCAGATATTTGTCAAGACACTTACTGGCAAGACGATTACACTGGAAGTGGAAAGCTCA 77569 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | ||| | || | ||| ||||| || || ||||| || ||||| Sbjct 77568 GACACGATCGACAACGTCAAGTCCAAGATTCAA-GACAAGGAGGGTATTCCGCCCGACCA 77510 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG--CACTGTGGGCGATTAC 25175 |||||| | || |||||||||||||| || || || | || |||||| | || ||| Sbjct 77509 ACAGCGACTGATCTTTGCCGGCAAACAGTTGGAGGACGGACGAACACTGTCG--GACTAC 77452 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| || || ||| || || || ||||| || || | ||||| Sbjct 77451 AACATTCAGAAGGAGAGCACCCTGCACTTGGTGCTGAGACTGCGTGGAGG 77402 Score = 100 bits (110), Expect = 2e-16 Identities = 154/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| | || || ||||| Sbjct 78084 ATGCAGATCTTCGTCAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAGC 78025 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| || || ||| | || | ||| ||||| ||||| ||||| || || Sbjct 78024 GACACCATCGA--CAATGTCAAGTCCAAGATTCAG-GACAAGGAAGGCATTCCCCCGGAT 77968 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | ||||| |||||||||||| | ||||||| || || || |||| || Sbjct 77967 CAACAGCGTCTCATTTTCGCCGGCAAACAACTTGAAGATGGCCGTACCTTGAGCGACTAT 77908 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || || || || || || Sbjct 77907 AACATCCAGAAGGAATCTACCCTTCACTTGGTCCT 77873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326637454270