Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq185 141 8e-29 >seq185 Length=319224 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || ||| | || || |||||||||| | | Sbjct 77628 ATGCAGATATTTGTCAAGACACTTACTGGCAAGACGATTACACTGGAAGTGGAAAGCTCA 77569 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||||||||||||||||||||| ||||| ||| Sbjct 77568 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCGCCCGACCAA 77509 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||||||||||||||| ||||| || || | || || |||||| Sbjct 77508 CAGCGACTGATCTTTGCCGGCAAACAGTTGGAGGACGGACGAACACTGTCGGACTACAAC 77449 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || |||| | || || || || || |||| |||||| Sbjct 77448 ATTCAGAAGGAGAGCACCCTGCACTTGGTGCTGAGACTGCGTGGAGGT 77401 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| || | ||||| || ||| |||| || || || ||| | | Sbjct 77856 ATGCAGATATTCGTTAAGACGCTTACCGGCAAGACGATCACGCTCGAGGTTGAATCGAGT 77797 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || ||||||||||| || ||||| || || ||| Sbjct 77796 GACACCATCGACAACGTCAAGAGCAAGATCCAAGACAAGGAAGGCATTCCTCCGGACCAA 77737 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || ||||| ||||| || || || || ||| ||| ||||||| |||||| Sbjct 77736 CAACGTCTGATCTTTGCTGGCAAGCAATTGGAAGACGGCCGTACCCTCTCCGACTACAAC 77677 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || ||||| ||| | ||| | || | || | ||||||||| Sbjct 77676 ATCCAGAAGGAATCAACCCTCCATCTCGTCCTCCGGCTTCGCGGAGGT 77629 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| ||||| || || ||| | Sbjct 78084 ATGCAGATCTTCGTCAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAGC 78025 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || ||||| |||||||| || ||||| || |||||| Sbjct 78024 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGCATTCCCCCGGATCAA 77965 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || ||||||||||| | || ||| ||| ||| | ||| || ||| Sbjct 77964 CAGCGTCTCATTTTCGCCGGCAAACAACTTGAAGATGGCCGTACCTTGAGCGACTATAAC 77905 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || ||||| ||| | || || || | || | |||||||| Sbjct 77904 ATCCAGAAGGAATCTACCCTTCACTTGGTCCTTCGTCTCCGCGGAGG 77858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726680217770