Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq185 167 4e-36 seq101 138 2e-27 seq42 109 1e-18 >seq185 Length=319224 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || | || |||||||| || ||| ||| || || ||||| || || || Sbjct 77402 CCTCCACGCAGTCTCAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCGAC 77461 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | || || || ||||| || ||||| || || |||| ||||||||||| ||| Sbjct 77462 AGTGTTCGTCCGTCCTCCAACTGTTTGCCGGCAAAGATCAGTCGCTGTTGGTCGGGCGGA 77521 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||| | ||||||| ||||| ||||||| ||| ||| Sbjct 77522 ATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCTGAGCTTTCCACT 77581 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || || || || || || |||||||| ||||||||||| Sbjct 77582 TCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 77628 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||||||||| || | || | || || || || || || |||||||| || |||||| Sbjct 77630 CCTCCGCGAAGCCGGAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAG 77689 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| || ||||| || || || || || | ||||||||| || ||| Sbjct 77690 AGGGTACGGCCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGGTCCGGAGGA 77749 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| ||||| ||||||| ||||||||||| ||||| || Sbjct 77750 ATGCCTTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTGTCACTCGATTCAACC 77809 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || || || ||||| |||||||||||||| Sbjct 77810 TCGAGCGTGATCGTCTTGCCGGTAAGCGTCTTAACGAATATCTGCAT 77856 Score = 167 bits (184), Expect = 4e-36 Identities = 177/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 |||||||| || || | |||||||| || || || || || ||||||||||| ||| Sbjct 77858 CCTCCGCGGAGACGAAGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAGTCGCTC 77917 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | || || |||||||| ||||| | ||||| || || ||| Sbjct 77918 AAGGTACGGCCATCTTCAAGTTGTTTGCCGGCGAAAATGAGACGCTGTTGATCCGGGGGA 77977 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 |||||||||||||| |||||||| | |||||| ||||||||||| ||| || || || Sbjct 77978 ATGCCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTC-GCTGGACTCGAC 78036 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464 || | |||||||| || || || || ||||||||||| |||||||| || Sbjct 78037 CTCAAGCGTGATGGTCTTGCCAGTAAGTGTCTTGACGAAGATCTGCATGAT 78087 >seq101 Length=409543 Score = 138 bits (152), Expect = 2e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || ||||| || || ||| || || | ||||| || | ||||| |||||||| || Sbjct 84943 TTCTGGATATTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 84884 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | || || ||||| ||||| ||||||||||||||||||||||| | |||||| ||| Sbjct 84883 AATCGCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCG 84824 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| | || || || || | ||||||||| || |||||||||||||||||||| Sbjct 84823 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 84765 >seq42 Length=56582 Score = 109 bits (120), Expect = 1e-18 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||| ||| || ||||| || || |||||||| || |||||| Sbjct 29385 CCACCACGAAGACGGAGGACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAG 29326 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | ||||| |||||||| || || | ||| |||||||| ||| Sbjct 29325 AGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGA 29266 Query 68355 ATGCCTTCCTTGTCT 68369 || |||||||||||| Sbjct 29265 ATCCCTTCCTTGTCT 29251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921619427767760