Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq185 161 2e-34 seq101 102 2e-16 >seq185 Length=319224 Score = 161 bits (178), Expect = 2e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || |||||||| | || ||| || ||||| || ||||||| | Sbjct 77630 CCTCCGCGAAGCCGGAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAG 77689 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| ||||| || || || ||||||||||| ||||| || Sbjct 77690 AGGGTACGGCCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGGTCCGGAGGA 77749 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || ||||| || || ||||| || ||| || ||||| || || | || |||||||| || Sbjct 77750 ATGCCTTCCTTGTCTTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCACTCGATTCAAC 77808 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct 77809 CTCGAGCGTGATCGTCTTGCCGGTAAGCGTCTTAACGAATATCTGCAT 77856 Score = 134 bits (148), Expect = 3e-26 Identities = 174/238 (73%), Gaps = 7/238 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || |||||||| | ||| || | |||| || ||| || ||||| ||||||| Sbjct 77854 CATG-CCTCCGCGGAGACGAAGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAGT 77912 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 || | || || || ||||| | |||||| || ||||| || ||||||||||| || Sbjct 77913 CGCTCAAGGTACGGCCATCTTCAAGTTGTTTGCCGGCGAAAATGAGACGCTGTTG---AT 77969 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 | ||| || ||||| || ||||| || || | || || || || || | ||||| | Sbjct 77970 CCGGGGGAATGCCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGG 78029 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476 | || || || |||||||| ||||| || || || ||||||||||| |||||||| || Sbjct 78030 ACTCGACCTCAAGCGTGATGGTCTTGCCAGTAAGTGTCTTGACGAAGATCTGCATGAT 78087 Score = 105 bits (116), Expect = 2e-17 Identities = 164/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || || || || ||||| || || | || | ||||| || || || || || ||||| Sbjct 77399 TGACCTCCACGCAGTCTCAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCC 77458 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | || || |||||||| || || ||||| || || |||||||| |||||||| Sbjct 77459 GACAGTGTTCGTCCGTCCTCCAACTGTTTGCCGGCAAAGATCAGTCGCTGTTGGTCGGGC 77518 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || || || || || || | || ||||| || || | || ||| | Sbjct 77519 GGAATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCTGAGCT---T 77575 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || |||||||| || || || |||||||| ||||||||||| Sbjct 77576 TCCACTTCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 77628 >seq101 Length=409543 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || |||||||| |||||| || ||||| || || || | ||| || || ||||||||| Sbjct 84943 TTCTGGATATTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 84884 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 | ||||| || | |||||| ||||| || || || || || | || || || || Sbjct 84883 AATCGCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCG 84824 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | ||| ||| || || ||||| ||||| ||||| || || || ||||||||||| Sbjct 84823 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 84765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179650500504924