Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq185 107 2e-18 seq101 93.3 5e-14 >seq185 Length=319224 Score = 107 bits (118), Expect = 2e-18 Identities = 168/234 (72%), Gaps = 10/234 (4%) Strand=Plus/Plus Query 41980 GACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAG 42039 ||||||| | | | || |||||| |||| ||||||||||| ||||| ||||| || | Sbjct 77400 GACCTCCACGCAGTCTCAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCG 77459 Query 42040 CCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTG 42099 ||| || || |||| || | ||| || || || || || |||||||| ||||||| | Sbjct 77460 ACAGTGTTCGTCCGTCCTCCAACTGTTTGCCGGCAAAGATCAGTCGCTGTTGGTCGGGCG 77519 Query 42100 GCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGA 42154 | | | |||||||| | ||| | || | |||| ||| | | | |||||| ||| Sbjct 77520 GAATACCCTCCTTGT-CTTGAATCTTGGACTTGA-CGTTGTCGATCGTGTCTGAGCT--- 77574 Query 42155 TTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||| || | || || || ||||| || || ||||| ||||| || ||||| Sbjct 77575 TTCCACTTCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 77628 >seq101 Length=409543 Score = 93.3 bits (102), Expect = 5e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || |||||||| || ||| || || | || || || ||||| || ||||| | Sbjct 84945 CCTTCTGGATATTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 84886 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTC 42137 | | |||||||||||| | ||| | || ||||||| | ||| | || | |||| | Sbjct 84885 TCAATCGCTGCTGGTCAGGTGGGATGCCTTCCTTGT-CTTGAATCTTGGACTTGACATTG 84827 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||||| ||| || || |||| |||||||| |||||||| || ||||| || Sbjct 84826 TCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 84767 Query 42198 AAG 42200 ||| Sbjct 84766 AAG 84764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543211048138720