Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq185 100 3e-16 seq195 89.7 5e-13 seq42 87.8 2e-12 >seq185 Length=319224 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || ||||| | || ||||| || || |||||||| || | Sbjct 77629 ACCTCCGCGAAGCCGGAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGA 77688 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||| || ||||||| | |||||||| ||| | || || || || ||||| ||||| Sbjct 77689 GAGGGTACGGCCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGGTCCGGAGG 77748 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || || ||| || || | || |||| | || || Sbjct 77749 AATGCCTTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTGTCACTCGATTCAAC 77808 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||||| | || || ||||| || ||||| Sbjct 77809 CTCGAGCGTGATCGTCTTGCCGGTAAGCGTCTTAACGAATATCTGCAT 77856 >seq195 Length=280307 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 155226 GTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCAA-CAAGAAACACGAAGATAA 155284 || || || || || | ||| |||||||| |||| ||| | ||| || || || || | Sbjct 68626 GTGTCATATATGCCCTCGATACTGTCTTCCTTCAT-GTCGATCAAAAAGCATGAGGACAG 68568 Query 155285 TTGAGGTTGAGGGCAGCCGGCCGCAAATAATGTAGGACTAGCGTGTGTAAA-CATTTTGT 155343 |||||||||||| |||||| || | ||| || |||||| || || || ||| | Sbjct 68567 TTGAGGTTGAGGTGTGCCGGCATTGAACAGTGTCGGTGAAGCGTGGGTGAAGCACTTT-T 68509 Query 155344 TGGCGGTTAAGTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCG 155403 || | | ||| || || |||||||| |||| ||| |||||| || |||| | Sbjct 68508 GGGACATGAGGTTATACGTCTCGATGGCCTTTTCAACATCATCACCGTGGATGCCGACTG 68449 Query 155404 CCACGCGCATCAGCATGTGTTGAATGCGCTCCGCAAC 155440 |||| ||||| |||||||||||| ||||| || || Sbjct 68448 CCACACGCATGAGCATGTGTTGAGGTCGCTCGGCGAC 68412 >seq42 Length=56582 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || |||||||| || | || ||||| ||||||| || ||||||||| Sbjct 29355 GTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCTTCGAGTTGCTTGCCG 29296 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 || | || || || ||||||||||| ||||| ||||| || ||| || Sbjct 29295 GCGAAGATCAGGCGTTGCTGGTCGGGGGGAATCCCTTCCTTGTCTGGT 29248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643188645520