Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq185 118 2e-21 seq42 95.1 3e-14 >seq185 Length=319224 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| || ||||| || || ||||| |||| ||||||||| | | || Sbjct 77636 CGAAGCCGGAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTA 77695 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||||| ||||| || || ||||| ||||| || ||||||||| ||| ||| Sbjct 77696 CGGCCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGGTCCGGAGGAATGCCT 77755 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| ||| ||| |||| |||||| | | ||| || || | | Sbjct 77756 TCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTGTCACTCGATTCAACCTCGAGC 77815 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || || || || || || || || || Sbjct 77816 GTGATCGTCTTGCCGGTAAGCGTCTTAACGAATATCTG 77853 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || || || ||||| |||| ||| ||||| ||| || | |||||| Sbjct 77873 AGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAGTCGCTCAAGGTACGGCCATCT 77932 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || || || |||||||| ||||||||||| || ||||| ||| ||||| ||| Sbjct 77933 TCAAGTTGTTTGCCGGCGAAAATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTCC 77992 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || |||| |||||| | | || || || | |||||| ||| Sbjct 77993 TGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGCGTGATGGTC 78052 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || || || Sbjct 78053 TTGCCAGTAAGTGTCTTGACGAAGATCTG 78081 >seq42 Length=56582 Score = 95.1 bits (104), Expect = 3e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| |||||||| || || ||||| |||| ||||||||| | | ||| Sbjct 29379 CGAAGACGGAGGACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTG 29320 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| || ||||| ||||||||||| || || |||||||| || ||| ||| Sbjct 29319 CGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGAATCCCT 29260 Query 199529 TC 199530 || Sbjct 29259 TC 29258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178917702927286