Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq185 118 1e-21 seq101 113 5e-20 seq42 100 3e-16 >seq185 Length=319224 Score = 118 bits (130), Expect = 1e-21 Identities = 143/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||||| || || || |||| || | |||||||| || || Sbjct 77666 TCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCTTCCAATTGCTTGCCAGCAAAG 77725 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| || || ||||| | || | || |||||||| |||||| |||||| ||| Sbjct 77726 ATCAGACGTTGTTGGTCCGGAGGAATGCCTTCCTTGTCTTGGATCTTGCTCTTGA-CGTT 77784 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| |||||||| || || | |||||| || ||||| || ||||| ||||| Sbjct 77785 GTCGATGGTGTCACTCGATTCAACCTCGAGCGTGATCGTCTTGCCGGTAAGCGTCTTAAC 77844 Query 46582 AAAGATTTGCAT 46593 || || ||||| Sbjct 77845 GAATATCTGCAT 77856 Score = 89.7 bits (98), Expect = 6e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | |||| || | ||| ||||| ||||| || |||||| Sbjct 77856 TGCCTCCGCGGAGACGAAGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAGTCGC 77915 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || || | || || || || ||||||||||| || | ||||| || || | | Sbjct 77916 TCAAGGTACGGCCATCTTCAAGTTGTTTGCCGGCGAAAATGAGACGCTGTTGATCCGGGG 77975 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||||||||| ||||| ||||| | | | |||||||| || || | Sbjct 77976 GAATGCCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGA 78035 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | ||||||||| ||||| || || || || || ||||| ||||| Sbjct 78036 CCTCAAGCGTGATGGTCTTGCCAGTAAGTGTCTTGACGAAGATCTGCAT 78084 >seq101 Length=409543 Score = 113 bits (124), Expect = 5e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||||||||||||| || ||||| | || || || |||||||||||||| | Sbjct 84945 CCTTCTGGATATTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 84886 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 |||| ||||||||||| | || | || |||||||| ||||| ||||| | Sbjct 84885 TCAATCGCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGAATCTTGGACTTGACATTGT 84826 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | ||||||| ||| || || || | |||||||| |||||||| || || || || | Sbjct 84825 CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 84766 Query 46584 AG 46585 || Sbjct 84765 AG 84764 >seq42 Length=56582 Score = 100 bits (110), Expect = 3e-16 Identities = 81/98 (83%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||||| |||||||| |||| ||||| |||||||||||||| Sbjct 29349 TCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAG 29290 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| ||| |||||||||| || | | |||||||| Sbjct 29289 ATCAGGCGTTGCTGGTCGGGGGGAATCCCTTCCTTGTC 29252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565236577106160