Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq185 111 2e-19 seq101 93.3 4e-14 seq42 91.5 1e-13 >seq185 Length=319224 Score = 111 bits (122), Expect = 2e-19 Identities = 157/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| |||||||| || ||||| || ||||| || ||||| |||| || || | | Sbjct 77856 ATGCAGATATTCGTTAAGACGCTTACCGGCAAGACGATCACGCTCGAGGTTGAATCGAGT 77797 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || |||| ||||| || || ||||| | |||| Sbjct 77796 GACACCATCGACAACG--TCAAGAGCAAGATCCAAGACAAGGAAGGCATTCCTCCGGACC 77739 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || || || | || ||||| || |||| |||| || |||||| |||||||| Sbjct 77738 AACAACGTCTGATCTTTGCTGGCAAGCAATTGGAAGACGGCCGTACCCTCTCCGACTACA 77679 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| |||||| | || || ||| | || || || Sbjct 77678 ACATCCAGAAGGAATCAACCCTCCATCTCGTCCTCCG 77642 Score = 95.1 bits (104), Expect = 1e-14 Identities = 95/121 (79%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| ||||| ||||||||||||| || || | || ||||||||| |||| Sbjct 77535 GACAAGGAGGGTATTCCGCCCGACCAACAGCGACTGATCTTTGCCGGCAAACAGTTGGAG 77476 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCT 38455 |||| || || || ||||||||||| || ||||| ||| || ||||| |||||||| Sbjct 77475 GACGGACGAACACTGTCGGACTACAACATTCAGAAGGAGAGC-ACCCTGCACTTGGTGCT 77417 Query 38456 G 38456 | Sbjct 77416 G 77416 >seq101 Length=409543 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| |||| |||||| | |||||| | Sbjct 84765 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATC 84824 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || || | ||||| || || || || | ||||| ||||| | Sbjct 84825 GACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGCATCCCACCTGACCAGCAGCGATTG 84884 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| ||||| || || || || | |||||||| | ||||||||| ||||| ||| Sbjct 84885 ATCTTCGCCGGCAAGCAACTTGAGGATGGCCGCACCCTGAGCGACTACAATATCCAGAAG 84944 Query 38433 G 38433 | Sbjct 84945 G 84945 >seq42 Length=56582 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| || || |||||| ||||||| || || || || | ||| ||||| || || || Sbjct 29252 GACAAGGAAGGGATTCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 29311 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| ||||| ||| ||||||||||||||| |||||| | || || || |||| || Sbjct 29312 GACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAATCCACCCTCCACCTGGTCCTC 29371 Query 38457 CGT 38459 ||| Sbjct 29372 CGT 29374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171186942720