Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq215 116 1e-20 seq185 113 2e-19 >seq215 Length=636932 Score = 116 bits (128), Expect = 1e-20 Identities = 228/337 (68%), Gaps = 9/337 (3%) Strand=Plus/Minus Query 451261 TATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGA 451320 |||||| || | || ||||| || || || ||| ||| | || || || | | Sbjct 62403 TATGGTCCTGGCCAAGATGAAGGAGACTGCCGAAGCATACCTAGGCAAGCCCGTCAAGAA 62344 Query 451321 TGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGC 451380 ||| || | ||||||||||| || ||||| ||| || || ||||| || ||||| || Sbjct 62343 TGCCGTCGTCACTGTTCCCGCCTACTTCAACGATATGCAGCGTCAAGCCACAAAAGACGC 62284 Query 451381 AGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCT 451440 || || ||| | || || |||||||| || || | ||||||||||| |||||||| || Sbjct 62283 TGGGCAAATTTCCGGGTTGAATGTTCTCCGTGTTGTCAATGAACCTACCGCAGCTGCGCT 62224 Query 451441 AGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTT 451500 || ||||| || | | ||| | ||| || | || || | |||| | Sbjct 62223 CGCGTATGGCCTCG-------AGAAGGA--AGATGATCGCATCATCGCTGTCTATGATCT 62173 Query 451501 TGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAA 451560 ||||| || || ||||| |||| | || || | | || || ||||| || || Sbjct 62172 AGGTGGTGGCACCTTTGATATTTCTATCCTCGAGATCCAGAAGGGCGTTTTTGAGGTCAA 62113 Query 451561 GGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 | ||||||||||||| || || || ||||| |||||| Sbjct 62112 GTCAACCAATGGTGACACCCACCTGGGAGGCGAAGAT 62076 >seq185 Length=319224 Score = 113 bits (124), Expect = 2e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106 || ||| | || ||||| || ||||| ||||| || || || || ||||| || || || Sbjct 78087 ATCATGCAGATCTTCGTCAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCC 78028 Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 || | ||| || | | || || ||||| || |||||||| ||||| || ||| Sbjct 78027 AGCGACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGCATTCCCCCGGAT 77968 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 ||||| ||| | |||||| | || ||||||||||||||||| | || ||| || ||| Sbjct 77967 CAACAGCGTCTCATTTTCGCCGGCAAACAACTTGAAGATGGCCGTACCTTGAGCGACTAT 77908 Query 391227 AATATTGATAAGGATGCAACACTTCACTTAGT 391258 || || | ||||| | || |||||||| || Sbjct 77907 AACATCCAGAAGGAATCTACCCTTCACTTGGT 77876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975711869015864