Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq204 114 1e-20 >seq204 Length=641555 Score = 114 bits (126), Expect = 1e-20 Identities = 267/394 (68%), Gaps = 9/394 (2%) Strand=Plus/Plus Query 154711 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGG 154770 |||| ||||| ||||| || | || || || ||||| || ||||| ||| | ||||| Sbjct 639140 GAAAGGTATGCTTGATCCCCGTCTCCGCTCACGGAACGAACCCTGCATCTGCGGCCATGG 639199 Query 154771 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGAT--GATGAT-GGTAACATAGACATCAAAG 154827 | || ||||||||||| | || || || || || || || | || ||||| | Sbjct 639200 CTGGAATGAAAGTTGTCCCATTGAAATGCGACACGAAGACCGGAAATCTGGATATCAAGG 639259 Query 154828 ATCTAGAGAAGAAA-GCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATAC 154886 | || || ||||| || | | | | | | ||| ||| | |||||| |||||||| Sbjct 639260 ACCTCAAGGAGAAATGCGAAAA-GCACAAAGATGACCTGGCTGCAATTATGGTTACATAC 639318 Query 154887 CCATCTACACATGGTGTATTTGAAACTAACATT--AGACAGATATGTAAGATCGTTCATG 154944 || ||| |||||| || ||| | | || | || || | ||| |||| || || | Sbjct 639319 CCCAGTACTTTTGGTGTTTTCGAACC-AGCAATCAAGGAAGTT-TGTCAGATTGTGCACG 639376 Query 154945 ACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAA 155004 | | || ||||| || || | || || || || || ||||| || | || ||| | Sbjct 639377 AACACGGCGGTCAAGTTTACATGGACGGTGCCAACCTCAATGCTCAAATCGGCCTATGCA 639436 Query 155005 AACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTC 155064 | || | || ||| || ||||| || ||||| ||| | || || || |||||||||| Sbjct 639437 ACCCCGGCGAAATTGGAGCTGATGTGTGCCATCTGAACCTGCACAAGACTTTCTGTATTC 639496 Query 155065 CACATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT 155098 | || |||||||| || |||||||| || || || Sbjct 639497 CCCACGGAGGTGGTGGACCTGGCGTGGGACCGAT 639530 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 153216 GGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGT 153275 ||||||||||| || | ||| || || || || | |||| | || || ||||| Sbjct 637534 GGATACTATGGGACAACTACTCCACCGGTTATCACGAGAAATATACTGGAAAATCCGGCG 637593 Query 153276 TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTA 153335 |||||||| ||| || || ||||| || ||||| ||||| | |||||| | | Sbjct 637594 TGGTACACTAGTTATACCCCGTATCAGGCGGAGATCAGCCAGGGTCGTTTGGAATCGCTG 637653 Query 153336 TTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTA 153395 || |||| |||||| ||| | || || || || || | | || || ||||||||| | Sbjct 637654 TTGAATTTCCAAACCCTCGTGACCGATCTCACGGGCCTTGCGATCGCCAACGCATCTGTC 637713 Query 153396 TTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 | ||||||| ||||| || || ||||| ||| Sbjct 637714 CTCGATGAAGGCACTGCTGCTGCTGAAGCCATG 637746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579210932038720