Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq204 134 2e-26 >seq204 Length=641555 Score = 134 bits (148), Expect = 2e-26 Identities = 268/392 (68%), Gaps = 5/392 (1%) Strand=Plus/Plus Query 159386 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGG 159445 |||| ||||| ||||| || | || || || ||||| || |||||||| || | |||| Sbjct 639140 GAAAGGTATGCTTGATCCCCGTCTCCGCTCACGGAACGAACCCTGCATCTGCGGCCATGG 639199 Query 159446 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGAT--GATGAT-GGCAACATAGACATCAAAG 159502 | || ||||||||||| | || || || || || || || | || ||||| | Sbjct 639200 CTGGAATGAAAGTTGTCCCATTGAAATGCGACACGAAGACCGGAAATCTGGATATCAAGG 639259 Query 159503 ATCTAGAGAAGAAA-GCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATAT 159561 | || || ||||| || | | | | | | ||| ||| | |||||| ||||||| Sbjct 639260 ACCTCAAGGAGAAATGCGAAAA-GCACAAAGATGACCTGGCTGCAATTATGGTTACATAC 639318 Query 159562 CCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAG 159621 || ||| |||||| || ||| || |||| | | ||| ||||||| || || Sbjct 639319 CCCAGTACTTTTGGTGTTTTCGAACCAGCAATCAAGGAAGTTTGTCAGATTGTGCACGAA 639378 Query 159622 AATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAA 159681 | || ||||| || || | || ||||| || || ||||| || | || ||| || Sbjct 639379 CACGGCGGTCAAGTTTACATGGACGGTGCCAACCTCAATGCTCAAATCGGCCTATGCAAC 639438 Query 159682 CCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCA 159741 || | || ||| || ||||| || ||||| ||| | || ||||| ||||||||||| Sbjct 639439 CCCGGCGAAATTGGAGCTGATGTGTGCCATCTGAACCTGCACAAGACTTTCTGTATTCCC 639498 Query 159742 CATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT 159773 || |||||||| || |||||||| || || || Sbjct 639499 CACGGAGGTGGTGGACCTGGCGTGGGACCGAT 639530 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 157891 GGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGT 157950 ||||||||||| || | || || || || || | |||| | || || ||||| Sbjct 637534 GGATACTATGGGACAACTACTCCACCGGTTATCACGAGAAATATACTGGAAAATCCGGCG 637593 Query 157951 TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTA 158010 |||||||| ||| || || ||||| || ||||| ||||| | |||||| | | Sbjct 637594 TGGTACACTAGTTATACCCCGTATCAGGCGGAGATCAGCCAGGGTCGTTTGGAATCGCTG 637653 Query 158011 TTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCATCTCTA 158070 || |||| |||||| ||| | || || ||||| || || |||| || ||||||||| | Sbjct 637654 TTGAATTTCCAAACCCTCGTGACCGATCTCACGGGCCTTGCGATCGCCAACGCATCTGTC 637713 Query 158071 TTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 | ||||||| ||||| || || ||||| ||| Sbjct 637714 CTCGATGAAGGCACTGCTGCTGCTGAAGCCATG 637746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588049303534880