Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq185 141 2e-28 seq101 102 2e-16 >seq185 Length=319224 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||||| || | ||| || ||| ||| || ||||| ||||| || | || |||| Sbjct 77411 AGTCTCAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCGACAGTGTTCGT 77470 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 || || || | ||| || || || ||||| ||||| |||||||| || ||||| || || Sbjct 77471 CCGTCCTCCAACTGTTTGCCGGCAAAGATCAGTCGCTGTTGGTCGGGCGGAATACCCTCC 77530 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||||||||| || ||||||||| || || ||||| || ||||||||||| || ||| Sbjct 77531 TTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCTGAGCTTTCCACTTCCAGTGTA 77590 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||| || || | || || || || | ||||| Sbjct 77591 ATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTGCAT 77628 Score = 122 bits (134), Expect = 2e-22 Identities = 155/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || || || || || || || ||||| |||| || || | || ||||| Sbjct 77648 ACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCTTCC 77707 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | ||||| || || ||||| || ||||||||||| |||||||||||||| |||||||| Sbjct 77708 AATTGCTTGCCAGCAAAGATCAGACGTTGTTGGTCCGGAGGAATGCCTTCCTTGTCTTGG 77767 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTC 195108 || || ||||||||| || |||||||| ||| ||| || || || || | |||| Sbjct 77768 ATCTTGCTCTTGACGTTGTCGATGGTGTCACTCGA---TTCAACCTCGAGCGTGATCGTC 77824 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | || || ||||| | ||||| Sbjct 77825 TTGCCGGTAAGCGTCTTAACGAATATCTGCAT 77856 Score = 100 bits (110), Expect = 6e-16 Identities = 149/207 (72%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCT 194995 |||||| || || || || || || || || ||| |||| || | |||||||| || | Sbjct 77881 GTGAAGGGTAGATTCCTTCTGGATGTTATAGTCGCTCAAG-GTACGGCCATCTTCAAGTT 77939 Query 194996 GCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055 | || || ||||| || || || ||||| || || ||||||||||| ||||| ||||| | Sbjct 77940 GTTTGCCGGCGAAAATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTCCTGAATCT 77999 Query 195056 TTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCTTTCC 195113 | |||||| || || ||||||| | | || || || ||||| || | ||||| || Sbjct 78000 TGGACTTGACATTGTCGATGGTGTCGCTGGAC--TCGACCTCAAGCGTGATGGTCTTGCC 78057 Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | ||||| Sbjct 78058 AGTAAGTGTCTTGACGAAGATCTGCAT 78084 >seq101 Length=409543 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || |||||||| ||| || || | ||||| || || ||||| || |||||||| Sbjct 84943 TTCTGGATATTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 84884 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 | ||| || ||||| || || |||||||| ||||||||||| || |||||| || || Sbjct 84883 AATCGCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCG 84824 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || ||||| || || || || ||||| | ||||| || || | || || ||||| Sbjct 84823 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 84765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109477932469886