Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 3e-14 >seq2 Length=557246 Score = 93.3 bits (102), Expect = 3e-14 Identities = 198/293 (68%), Gaps = 6/293 (2%) Strand=Plus/Minus Query 30049 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCCACG 30105 ||||| |||| || ||| || |||||||| | ||||||| || | | | | |||| Sbjct 154935 TTCCACGCGCTCAGGATAATCCGCCTGTCGTATGGGTTGGTCTTCAATTTTCGCACCACC 154876 Query 30106 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 30165 | |||| | ||| ||||| || | ||||||||||| || |||| ||| || Sbjct 154875 TC--TTTG-ATCTGGTCCACTCCTTTGCCCGAGTAGTCAGCATGGCAGTCCTCGTATGCT 154819 Query 30166 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30225 || || || |||| ||| || || ||||| || || || |||||||| || || | | Sbjct 154818 GCACCAAAGTGCCGCCATTGAAATCCGTAGACAGGGCCGAGGTCTCCTTCCTCGCGATCA 154759 Query 30226 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 30285 |||| ||| |||||| | ||| || | || || ||| ||||||| || | | || Sbjct 154758 ACGAATCCCAACTTGTCGAGAAATTCCCGCGAGCCATTGCCGTCCCAAATGTGGATGCCT 154699 Query 30286 TTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 30338 || ||||| ||| || ||||| | ||| || ||||||| || ||| Sbjct 154698 GCGTCAGAGAGAGGTTTCGATGTTGTGCAGCCTGATACAAACCACAACAACTC 154646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616315153034