Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq185 100 2e-15 >seq185 Length=319224 Score = 100 bits (110), Expect = 2e-15 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 ||||| ||||| || ||||| || || ||| || | || || || | || || Sbjct 77636 CGAAGCCGGAGGACGAGATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTA 77695 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | | ||||| | |||||| |||||||| || ||||||||||| || |||||||| ||| Sbjct 77696 CGGCCGTCTTCCAATTGCTTGCCAGCAAAGATCAGACGTTGTTGGTCCGGAGGAATGCCT 77755 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 ||||||||||| ||||| ||||| || || || ||| | | | || || Sbjct 77756 TCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTGTCACTCGATTCAACCTCGAGC 77815 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || ||||| || ||||||||||| || || Sbjct 77816 GTGATCGTCTTGCCGGTAAGCGTCTTAACGAATATCTG 77853 Score = 87.8 bits (96), Expect = 1e-11 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||||||||| || || || ||||| ||||| |||||||| || ||||| |||||||| Sbjct 77929 ATCTTCAAGTTGTTTGCCGGCGAAAATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTT 77988 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| |||||||| |||||| || || || || || ||||| || || Sbjct 77989 GTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGCGTGAT 78048 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| ||||| || || Sbjct 78049 GGTCTTGCCAGTAAGTGTCTTGACGAAGATCTG 78081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268168133128184