Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq195 84.2 1e-11 >seq195 Length=280307 Score = 84.2 bits (92), Expect = 1e-11 Identities = 193/288 (67%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 25931 TCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCT 25990 ||||| || || || ||| |||||| ||||| || || || | ||||| | |||||| Sbjct 68944 TCCATGAACAAGTCAGGAGTCCACAAGGCATAGAACAAGTCCCGTGCTCTGACCTCTTCT 68885 Query 25991 TTTCCGTGATTCTTTTTTAGATCTAAGAAA-TCAAAAATATCTGAGTGCCATGGTTCTAA 26049 || || || |||||| | || | | ||||| || || | || | ||||||||| || | Sbjct 68884 TTGCCATGGTTCTTTCTCAGGT-TCAGAAAGTCGAACACGTCCGCGTGCCATGGCTCGAG 68826 Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109 ||||||||||| |||| | || || || ||||| ||||| | ||| || | Sbjct 68825 GTAGATAGCAAAGGCACCTGGACGCTTGTTGCCGCCCTGATCAACGTAGCGTGCTGTATT 68766 Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTT 26169 ||||| || | ||| || | | ||| | || || || |||| ||| | Sbjct 68765 GTTGAAGACACGAAGCATGGGGATCAGGCCATTAGAGGTACCATTGGTGCCTGCAATATA 68706 Query 26170 GGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGC 26217 ||||||||| | || ||| ||||||| | ||| || || ||||| Sbjct 68705 GGATCCTGTGGCTCGAATGCAATGAGCATTGAGACCAATACCTCCAGC 68658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039204347350