Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq204 116 4e-21 >seq204 Length=641555 Score = 116 bits (128), Expect = 4e-21 Identities = 264/392 (67%), Gaps = 5/392 (1%) Strand=Plus/Minus Query 138189 ATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATTT 138248 || || || |||||||| || |||||||| || ||||||||||| ||||| || | || Sbjct 639530 ATCGGTCCCACGCCAGGTCCACCACCTCCGTGGGGAATACAGAAAGTCTTGTGCAGGTTC 639471 Query 138249 AGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAGA 138308 ||||| || ||||| || ||| || | || || ||| || | || ||||| || Sbjct 639470 AGATGGCACACATCAGCTCCAATTTCGCCGGGGTTGCATAGGCCGATTTGAGCATTGAGG 639411 Query 138309 TTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGTCTG 138368 || ||||| || | || || ||||| || | || || || |||| ||| | | || Sbjct 639410 TTGGCACCGTCCATGTAAACTTGACCGCCGTGTTCGTGCACAATCTGACAAACTTCCTTG 639351 Query 138369 ATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGTTCA 138428 || || ||| || |||||| ||| || ||||||| |||||| | || ||| Sbjct 639350 ATTGCTGGTTCGAAAACACCAAAAGTACTGGGGTATGTAACCATAATTGCAGCCAGGTCA 639291 Query 138429 AATGTATTCATGATTGC-TTTCTTCTCTAGATCTTTGATGTCTATGTTGCC-ATCATC-- 138484 | | | | | | || ||||| || || || ||||| || | || || || || Sbjct 639290 TCTTTGTGC-TTTTCGCATTTCTCCTTGAGGTCCTTGATATCCAGATTTCCGGTCTTCGT 639232 Query 138485 ATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTTCC 138544 || || || | |||||||||||||| |||||| | ||| ||||| || ||||| Sbjct 639231 GTCGCATTTCAATGGGACAACTTTCATTCCAGCCATGGCCGCAGATGCAGGGTTCGTTCC 639172 Query 138545 ATGTGCTGACTCTGGTATCAGACATACATTTC 138576 || || || | || |||| ||||| |||| Sbjct 639171 GTGAGCGGAGACGGGGATCAAGCATACCTTTC 639140 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| || || || || ||||| ||||||| | | ||||||||| || || | | || Sbjct 637746 CATGGCTTCAGCAGCAGCAGTGCCTTCATCGAGGACAGATGCGTTGGCGATCGCAAGGCC 637687 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 || || || || | ||| |||||| |||| || | | |||||| | ||||| || Sbjct 637686 CGTGAGATCGGTCACGAGGGTTTGGAAATTCAACAGCGATTCCAAACGACCCTGGCTGAT 637627 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 ||| || ||||| || || ||| |||||||| ||||| || || | |||| | Sbjct 637626 CTCCGCCTGATACGGGGTATAACTAGTGTACCACGCCGGATTTTCCAGTATATTTCTCGT 637567 Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCC 140071 || || || || ||| | || ||||||||||| Sbjct 637566 GATAACCGGTGGAGTAGTTGTCCCATAGTATCC 637534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578996532730160