Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq185 91.5 3e-13 >seq185 Length=319224 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| || || || || | | |||| |||| ||||| ||||| || ||||| || | || Sbjct 77446 AATGTTGTAGTCCGACAGTGTTCGTCCGTCCTCCAACTGTTTGCCGGCAAAGATCAGTCG 77505 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||||||||| || || || || || || ||||| || || || || || || || Sbjct 77506 CTGTTGGTCGGGCGGAATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGT 77565 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||||| ||| ||||| || ||||| || || ||||| | ||| || | |||||||| Sbjct 77566 GTCTGAGCTTTCCACTTCCAGTGTAATCGTCTTGCCAGTAAGTGTCTTGACAAATATCTG 77625 Query 172067 CAT 172069 ||| Sbjct 77626 CAT 77628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905133080936400