Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq195 109 2e-18 seq184 96.9 1e-14 >seq195 Length=280307 Score = 109 bits (120), Expect = 2e-18 Identities = 549/868 (63%), Gaps = 19/868 (2%) Strand=Plus/Minus Query 155583 AGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATC 155642 ||| ||| || |||||||| || || || ||| | | | ||||||| |||||| Sbjct 69277 AGAGCAAGGGAGGCCAGATTGCACACGGCGACCTCATCGGGAGCCGTGTATTCAACAATC 69218 Query 155643 TCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTA 155702 || ||| ||||| || ||| |||||| || || ||||||||||| || ||||| Sbjct 69217 TCGGTGCAAAGGTTGGAGCTCCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTGTTG 69158 Query 155703 CAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTT 155762 || ||||| ||||| || ||||| || || || || || | ||||| || ||||| Sbjct 69157 CAGGCATCTTTGTAGAGCATGTAAGGCGTACCGGTTTCGGTTTGTGCCTCGAGAATAGCA 69098 Query 155763 AGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATT--TCA 155820 |||||| | | || || | || | | || ||| ||| |||| || Sbjct 69097 TACCAGAGCTTCTGAGCCTTGACAGTCTGGCGACCACGACCCTCCCTCTCGTATTTCTCG 69038 Query 155821 TATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGC 155880 |||| || || | | || || || || ||| || ||||| || || || | Sbjct 69037 TATAGGGCATT--GAACTCATCGCCATAGACATCGGCGAGACCAGGTGCCTCATGAGGAC 68980 Query 155881 AAAACAGCGACCAAATT-----TTATTACCGATTACACGCTCCATAAATACATCACTCGC 155935 | || || | || ||| || || || ||||| ||||| || | ||| | Sbjct 68979 AGAAGAGTGTCC--ATTCCTGGTTCTTCTCG---ACACGTTCCATGAACAAGTCAGGAGT 68925 Query 155936 CCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA-CTCCTCATCGCCGTGATTCTTCCGTA 155994 ||| | |||||||| | ||||| || || ||| ||| || | ||| || ||||| | | Sbjct 68924 CCACAAGGCATAGAACAAGTCCCGTG-CTCTGACCTCTTCTTTGCCATGGTTCTTTCTCA 68866 Query 155995 GCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC-- 156052 | | | || || | || | || |||||| || || |||||||| ||| Sbjct 68865 GGTTCAGAAAGTCGAACACGTCCGCGTGCCATGGCTCGAGGTAGATAGCAAAGGCACCTG 68806 Query 156053 -ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAG 156111 | | | ||||| |||||||| || || || || || || |||||||||| ||||| | Sbjct 68805 GACGCTTGTTGCCGCCCTGATCAACGTAGCGTGCTGTATTGTTGAAGACACGAAGCATGG 68746 Query 156112 GAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACAT 156171 | || | ||||| || || |||||||| || ||||| || || | | |||| Sbjct 68745 GGATCAGGCCATTAGAGGTACCATTGGTGCCTGCAATATAGGATCCTGTGGCTCGAATGC 68686 Query 156172 TATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAG 156231 |||| || || |||||||| || | || || || ||||| ||| | | Sbjct 68685 AATGAGCATTGAGACCAATACCTCCAGCTGTCTTGGAGATCATGGCGCAGGTCTTGAGGG 68626 Query 156232 TATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATT 156291 | | | || || || ||| || || | ||| | | | |||| || | || Sbjct 68625 TGTCATATATGCCCTCGATACTGTCTTCCTTCATGTCGATCAAAAAGCATGAGGACAGTT 68566 Query 156292 GAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAG 156351 ||||| | ||||| || || ||||| ||||| |||| || || | || |||| | | Sbjct 68565 GAGGTTGAGGTGTGCCGGCATTGAACAGTGTCGGTGAAGCGTGGGTGAAGCACTTTTGGG 68506 Query 156352 ACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGA 156411 |||| | || ||||| | ||| |||| || | ||||| || | || | | Sbjct 68505 ACATGAGGTTATACGTCTCGATGGCCTTTTCAACATCATCACCGTGGATGCCGACTGCCA 68446 Query 156412 CCCTCATCCACATATGCTGAGGACGCTC 156439 | | ||| ||| || ||||| ||||| Sbjct 68445 CACGCATGAGCATGTGTTGAGGTCGCTC 68418 >seq184 Length=320303 Score = 96.9 bits (106), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 251431 TGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGATGCACCG 251490 || |||| | ||| ||| || |||| | || || | ||| ||| || ||||| Sbjct 264306 TGCACGCGGAAAGGATCCGACACGTCGAAAAGACGTTCTTTGAGGAATGACGAGGCACCA 264365 Query 251491 TGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTA 251550 || | ||||| || || || ||||||||||||||||| ||||||||||||||||| | | Sbjct 264366 TGCGCGATCATGCAGTCGCGTTCCATTTCACCGAAACGGAGACCACCATCGCGAGCACGA 264425 Query 251551 CCCTCGGCAGGCTGACGAGT-GAGATTAACCATAGGACCGATGGAGCGGCTATGTTGCTT 251609 || || ||||||| || || ||||| | ||||| | | ||| ||| ||| Sbjct 264426 CCTTCAACAGGCTGTCGGGTCAAGATT-TGAGTGGGACCCCTTGCCCGGGAATGGATCTT 264484 Query 251610 ATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 || | |||||||| ||||||| ||||| | | || |||| ||||| Sbjct 264485 GTCGTCGACCATATGTCTGAGACGTTGGTAATACGTAGGGCCGAGGAAGA 264534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471812734722946